Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 MIR572-201ENST00000384983 95 ntBASIC19.66■□□□□ 0.74
LINGO3P0C6S8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.66■□□□□ 0.74
LINGO3P0C6S8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINGO3P0C6S8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.64■□□□□ 0.74
LINGO3P0C6S8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.64■□□□□ 0.74
LINGO3P0C6S8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINGO3P0C6S8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.64■□□□□ 0.74
LINGO3P0C6S8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINGO3P0C6S8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 AL034346.1-201ENST00000568244 1277 ntBASIC19.64■□□□□ 0.73
LINGO3P0C6S8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.64■□□□□ 0.73
LINGO3P0C6S8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 SMUG1P1-201ENST00000590640 811 ntBASIC19.63■□□□□ 0.73
LINGO3P0C6S8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LINGO3P0C6S8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 AP004607.7-201ENST00000527152 1677 ntBASIC19.62■□□□□ 0.73
LINGO3P0C6S8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
LINGO3P0C6S8 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINGO3P0C6S8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms