Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT4O95628 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.12■□□□□ 0.49
CNOT4O95628 AL049796.1-201ENST00000565336 1766 ntBASIC18.12■□□□□ 0.49
CNOT4O95628 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT4O95628 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CNOT4O95628 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT4O95628 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT4O95628 BX276092.2-201ENST00000417668 665 ntBASIC18.11■□□□□ 0.49
CNOT4O95628 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.11■□□□□ 0.49
CNOT4O95628 AL589743.5-201ENST00000616611 1050 ntBASIC18.11■□□□□ 0.49
CNOT4O95628 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.11■□□□□ 0.49
CNOT4O95628 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT4O95628 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
CNOT4O95628 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CNOT4O95628 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT4O95628 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT4O95628 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT4O95628 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.11■□□□□ 0.49
CNOT4O95628 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
CNOT4O95628 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT4O95628 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CNOT4O95628 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT4O95628 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT4O95628 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT4O95628 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.1■□□□□ 0.49
CNOT4O95628 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 CYP21A1P-202ENST00000354927 1481 ntBASIC18.1■□□□□ 0.49
CNOT4O95628 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT4O95628 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.1■□□□□ 0.49
CNOT4O95628 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.1■□□□□ 0.49
CNOT4O95628 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT4O95628 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.1■□□□□ 0.49
CNOT4O95628 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CNOT4O95628 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.1■□□□□ 0.49
CNOT4O95628 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.09■□□□□ 0.49
CNOT4O95628 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 KRT18P68-201ENST00000392293 1000 ntBASIC18.09■□□□□ 0.49
CNOT4O95628 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.09■□□□□ 0.49
CNOT4O95628 LSM12P1-201ENST00000411836 588 ntBASIC18.09■□□□□ 0.49
CNOT4O95628 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CNOT4O95628 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.09■□□□□ 0.49
CNOT4O95628 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.09■□□□□ 0.49
CNOT4O95628 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.09■□□□□ 0.49
CNOT4O95628 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CNOT4O95628 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CNOT4O95628 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CNOT4O95628 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.08■□□□□ 0.49
CNOT4O95628 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CNOT4O95628 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CNOT4O95628 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CNOT4O95628 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT4O95628 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT4O95628 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT4O95628 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CNOT4O95628 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
CNOT4O95628 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.08■□□□□ 0.48
CNOT4O95628 AC093827.2-201ENST00000512654 315 ntBASIC18.08■□□□□ 0.48
CNOT4O95628 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.08■□□□□ 0.48
CNOT4O95628 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT4O95628 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.08■□□□□ 0.48
CNOT4O95628 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.08■□□□□ 0.48
CNOT4O95628 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CNOT4O95628 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CNOT4O95628 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT4O95628 AC087633.2-202ENST00000565166 1439 ntBASIC18.07■□□□□ 0.48
CNOT4O95628 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT4O95628 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CNOT4O95628 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CNOT4O95628 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.07■□□□□ 0.48
CNOT4O95628 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.07■□□□□ 0.48
CNOT4O95628 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.07■□□□□ 0.48
CNOT4O95628 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.07■□□□□ 0.48
CNOT4O95628 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT4O95628 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT4O95628 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.07■□□□□ 0.48
CNOT4O95628 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CNOT4O95628 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CNOT4O95628 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms