Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF1O95521 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 AL512625.2-201ENST00000417533 625 ntBASIC20.32■□□□□ 0.84
PRAMEF1O95521 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 PGM5P4-201ENST00000421970 445 ntBASIC20.32■□□□□ 0.84
PRAMEF1O95521 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 AF201337.1-201ENST00000520239 748 ntBASIC20.32■□□□□ 0.84
PRAMEF1O95521 AC010980.2-201ENST00000587099 1412 ntBASIC20.32■□□□□ 0.84
PRAMEF1O95521 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
PRAMEF1O95521 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PRAMEF1O95521 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF1O95521 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF1O95521 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF1O95521 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF1O95521 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PRAMEF1O95521 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF1O95521 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PRAMEF1O95521 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 AL121832.2-201ENST00000610979 668 ntBASIC20.3■□□□□ 0.84
PRAMEF1O95521 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PRAMEF1O95521 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.3■□□□□ 0.84
PRAMEF1O95521 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 MKRN4P-201ENST00000444706 1521 ntBASIC20.29■□□□□ 0.84
PRAMEF1O95521 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 NCF1B-203ENST00000435988 1254 ntBASIC20.29■□□□□ 0.84
PRAMEF1O95521 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 CYP2T3P-201ENST00000601990 817 ntBASIC20.29■□□□□ 0.84
PRAMEF1O95521 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.29■□□□□ 0.84
PRAMEF1O95521 AL356652.1-201ENST00000615962 565 ntBASIC20.29■□□□□ 0.84
PRAMEF1O95521 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.29■□□□□ 0.84
PRAMEF1O95521 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PRAMEF1O95521 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF1O95521 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF1O95521 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF1O95521 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PRAMEF1O95521 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 AL355472.2-201ENST00000422958 438 ntBASIC20.28■□□□□ 0.84
PRAMEF1O95521 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 AC083906.2-201ENST00000511578 360 ntBASIC20.28■□□□□ 0.84
PRAMEF1O95521 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.28■□□□□ 0.84
PRAMEF1O95521 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms