Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PTP4A3O75365 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.4■□□□□ 0.54
PTP4A3O75365 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PTP4A3O75365 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.39■□□□□ 0.54
PTP4A3O75365 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PTP4A3O75365 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
PTP4A3O75365 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
PTP4A3O75365 TCF3P1-201ENST00000423021 1937 ntBASIC18.39■□□□□ 0.53
PTP4A3O75365 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.39■□□□□ 0.53
PTP4A3O75365 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PTP4A3O75365 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PTP4A3O75365 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.38■□□□□ 0.53
PTP4A3O75365 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.38■□□□□ 0.53
PTP4A3O75365 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.38■□□□□ 0.53
PTP4A3O75365 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.38■□□□□ 0.53
PTP4A3O75365 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.38■□□□□ 0.53
PTP4A3O75365 AC019069.1-201ENST00000610008 1333 ntBASIC18.38■□□□□ 0.53
PTP4A3O75365 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 KRT8P36-201ENST00000489121 1440 ntBASIC18.38■□□□□ 0.53
PTP4A3O75365 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
PTP4A3O75365 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PTP4A3O75365 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTP4A3O75365 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
PTP4A3O75365 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTP4A3O75365 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PTP4A3O75365 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTP4A3O75365 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.37■□□□□ 0.53
PTP4A3O75365 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.37■□□□□ 0.53
PTP4A3O75365 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.37■□□□□ 0.53
PTP4A3O75365 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.37■□□□□ 0.53
PTP4A3O75365 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 SMG8-203ENST00000578922 2178 ntBASIC18.37■□□□□ 0.53
PTP4A3O75365 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTP4A3O75365 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A3O75365 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A3O75365 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.36■□□□□ 0.53
PTP4A3O75365 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A3O75365 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.36■□□□□ 0.53
PTP4A3O75365 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTP4A3O75365 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.36■□□□□ 0.53
PTP4A3O75365 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.36■□□□□ 0.53
PTP4A3O75365 AC007322.3-201ENST00000426526 701 ntBASIC18.36■□□□□ 0.53
PTP4A3O75365 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.36■□□□□ 0.53
PTP4A3O75365 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.36■□□□□ 0.53
PTP4A3O75365 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A3O75365 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PTP4A3O75365 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.36■□□□□ 0.53
PTP4A3O75365 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTP4A3O75365 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTP4A3O75365 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PTP4A3O75365 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.35■□□□□ 0.53
PTP4A3O75365 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
PTP4A3O75365 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTP4A3O75365 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.35■□□□□ 0.53
PTP4A3O75365 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PTP4A3O75365 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A3O75365 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms