Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.23■□□□□ 0.83
PCDHGA12O60330 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA12O60330 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA12O60330 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 SOX15-203ENST00000570788 1093 ntBASIC20.22■□□□□ 0.83
PCDHGA12O60330 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 AC069544.1-201ENST00000609399 999 ntBASIC20.22■□□□□ 0.83
PCDHGA12O60330 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA12O60330 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDHGA12O60330 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 AC073912.3-201ENST00000624414 853 ntBASIC20.21■□□□□ 0.83
PCDHGA12O60330 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
PCDHGA12O60330 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA12O60330 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 Z99916.2-201ENST00000604037 246 ntBASIC20.2■□□□□ 0.82
PCDHGA12O60330 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA12O60330 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA12O60330 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA12O60330 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms