Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 KRT18P14-201ENST00000534205 1250 ntBASIC22■■□□□ 1.11
LRRC53A6NM62 KRT18P20-201ENST00000548986 1279 ntBASIC22■■□□□ 1.11
LRRC53A6NM62 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22■■□□□ 1.11
LRRC53A6NM62 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22■■□□□ 1.11
LRRC53A6NM62 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC22■■□□□ 1.11
LRRC53A6NM62 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC53A6NM62 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC53A6NM62 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC53A6NM62 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC53A6NM62 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
LRRC53A6NM62 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
LRRC53A6NM62 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
LRRC53A6NM62 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
LRRC53A6NM62 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 AC091799.1-201ENST00000422823 811 ntBASIC21.99■■□□□ 1.11
LRRC53A6NM62 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.99■■□□□ 1.11
LRRC53A6NM62 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.99■■□□□ 1.11
LRRC53A6NM62 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.99■■□□□ 1.11
LRRC53A6NM62 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRC53A6NM62 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC53A6NM62 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC53A6NM62 RBM17P2-201ENST00000616397 1405 ntBASIC21.98■■□□□ 1.11
LRRC53A6NM62 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC53A6NM62 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC53A6NM62 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC53A6NM62 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRC53A6NM62 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.98■■□□□ 1.11
LRRC53A6NM62 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.97■■□□□ 1.11
LRRC53A6NM62 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRC53A6NM62 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC53A6NM62 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC53A6NM62 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
LRRC53A6NM62 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRC53A6NM62 AC243732.1-201ENST00000612648 864 ntBASIC21.96■■□□□ 1.11
LRRC53A6NM62 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC53A6NM62 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC53A6NM62 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC53A6NM62 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC53A6NM62 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
LRRC53A6NM62 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC53A6NM62 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.95■■□□□ 1.1
LRRC53A6NM62 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC53A6NM62 KRT18P61-201ENST00000585825 1298 ntBASIC21.95■■□□□ 1.1
LRRC53A6NM62 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.95■■□□□ 1.1
LRRC53A6NM62 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.95■■□□□ 1.1
LRRC53A6NM62 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC53A6NM62 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC53A6NM62 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.95■■□□□ 1.1
LRRC53A6NM62 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC53A6NM62 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.94■■□□□ 1.1
LRRC53A6NM62 AC019069.1-201ENST00000610008 1333 ntBASIC21.94■■□□□ 1.1
LRRC53A6NM62 AC007952.6-201ENST00000573168 2673 ntBASIC21.94■■□□□ 1.1
LRRC53A6NM62 AC003957.1-201ENST00000625108 2673 ntBASIC21.94■■□□□ 1.1
LRRC53A6NM62 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC53A6NM62 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms