Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 AC011484.1-201ENST00000377652 1995 ntBASIC14.64□□□□□ -0.07
TRGV4A0A0C4DH28 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 RARRES2P6-201ENST00000567333 442 ntBASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
TRGV4A0A0C4DH28 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 AC016769.1-201ENST00000409132 1010 ntBASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 AC137761.2-201ENST00000561729 223 ntBASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 AC145350.3-201ENST00000569033 163 ntBASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 UBE2DNL-204ENST00000602536 740 ntBASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 RARRES2P11-201ENST00000635158 484 ntBASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 AC116050.2-201ENST00000612102 1779 ntBASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRGV4A0A0C4DH28 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 STAC-204ENST00000457375 1366 ntTSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 SLC7A5P1-201ENST00000568957 537 ntBASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 MIR5787-201ENST00000611784 55 ntBASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRGV4A0A0C4DH28 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms