Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 AC069236.1-201ENST00000604339 616 ntBASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 AC092437.1-201ENST00000624794 1048 ntBASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 AF106564.1-201ENST00000607058 2553 ntBASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 AC027702.1-201ENST00000563810 1770 ntBASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 AC005229.4-201ENST00000610085 2198 ntBASIC15.41■□□□□ 0.06
TRAV2A0A0B4J234 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 AC080038.1-201ENST00000611274 1154 ntBASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRAV2A0A0B4J234 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 RARRES2P4-201ENST00000514074 484 ntBASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 VPS53-216ENST00000574029 585 ntTSL 4 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 OR10C1-204ENST00000622521 1039 ntBASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 AC008694.1-202ENST00000636953 945 ntBASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 AC068338.2-201ENST00000563278 1430 ntBASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV2A0A0B4J234 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
TRAV2A0A0B4J234 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms