Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
NckipsdQ9ESJ4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.7■■□□□ 1.7
NckipsdQ9ESJ4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NckipsdQ9ESJ4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NckipsdQ9ESJ4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NckipsdQ9ESJ4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NckipsdQ9ESJ4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NckipsdQ9ESJ4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NckipsdQ9ESJ4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NckipsdQ9ESJ4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NckipsdQ9ESJ4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NckipsdQ9ESJ4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NckipsdQ9ESJ4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
NckipsdQ9ESJ4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NckipsdQ9ESJ4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.64■■□□□ 1.7
NckipsdQ9ESJ4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC25.63■■□□□ 1.69
NckipsdQ9ESJ4 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NckipsdQ9ESJ4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
NckipsdQ9ESJ4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
NckipsdQ9ESJ4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.6■■□□□ 1.69
NckipsdQ9ESJ4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.6■■□□□ 1.69
NckipsdQ9ESJ4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
NckipsdQ9ESJ4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
NckipsdQ9ESJ4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
NckipsdQ9ESJ4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
NckipsdQ9ESJ4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
NckipsdQ9ESJ4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
NckipsdQ9ESJ4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
NckipsdQ9ESJ4 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.56■■□□□ 1.68
NckipsdQ9ESJ4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NckipsdQ9ESJ4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
NckipsdQ9ESJ4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
NckipsdQ9ESJ4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
NckipsdQ9ESJ4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
NckipsdQ9ESJ4 Gm7432-201ENSMUST00000210343 879 ntBASIC25.53■■□□□ 1.68
NckipsdQ9ESJ4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
NckipsdQ9ESJ4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
NckipsdQ9ESJ4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
NckipsdQ9ESJ4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
NckipsdQ9ESJ4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.51■■□□□ 1.67
NckipsdQ9ESJ4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.5■■□□□ 1.67
NckipsdQ9ESJ4 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.5■■□□□ 1.67
NckipsdQ9ESJ4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
NckipsdQ9ESJ4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
NckipsdQ9ESJ4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
NckipsdQ9ESJ4 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NckipsdQ9ESJ4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NckipsdQ9ESJ4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
NckipsdQ9ESJ4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
NckipsdQ9ESJ4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.46■■□□□ 1.67
NckipsdQ9ESJ4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
NckipsdQ9ESJ4 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
NckipsdQ9ESJ4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
NckipsdQ9ESJ4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
NckipsdQ9ESJ4 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
NckipsdQ9ESJ4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.44■■□□□ 1.66
NckipsdQ9ESJ4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
NckipsdQ9ESJ4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NckipsdQ9ESJ4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NckipsdQ9ESJ4 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NckipsdQ9ESJ4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC25.43■■□□□ 1.66
NckipsdQ9ESJ4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NckipsdQ9ESJ4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NckipsdQ9ESJ4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.42■■□□□ 1.66
NckipsdQ9ESJ4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.42■■□□□ 1.66
NckipsdQ9ESJ4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NckipsdQ9ESJ4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.41■■□□□ 1.66
NckipsdQ9ESJ4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
NckipsdQ9ESJ4 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC25.4■■□□□ 1.66
NckipsdQ9ESJ4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
NckipsdQ9ESJ4 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NckipsdQ9ESJ4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
NckipsdQ9ESJ4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.39■■□□□ 1.65
NckipsdQ9ESJ4 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NckipsdQ9ESJ4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.38■■□□□ 1.65
NckipsdQ9ESJ4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
NckipsdQ9ESJ4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NckipsdQ9ESJ4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.37■■□□□ 1.65
NckipsdQ9ESJ4 Gm11599-201ENSMUST00000118720 878 ntBASIC25.37■■□□□ 1.65
NckipsdQ9ESJ4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.36■■□□□ 1.65
NckipsdQ9ESJ4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NckipsdQ9ESJ4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.36■■□□□ 1.65
NckipsdQ9ESJ4 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NckipsdQ9ESJ4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.36■■□□□ 1.65
NckipsdQ9ESJ4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NckipsdQ9ESJ4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NckipsdQ9ESJ4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
NckipsdQ9ESJ4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
NckipsdQ9ESJ4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.31■■□□□ 1.64
NckipsdQ9ESJ4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NckipsdQ9ESJ4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NckipsdQ9ESJ4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
NckipsdQ9ESJ4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NckipsdQ9ESJ4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NckipsdQ9ESJ4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NckipsdQ9ESJ4 Gm30023-201ENSMUST00000197970 889 ntBASIC25.29■■□□□ 1.64
NckipsdQ9ESJ4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NckipsdQ9ESJ4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NckipsdQ9ESJ4 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
NckipsdQ9ESJ4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms