Protein–RNA interactions for Protein: Q9D4B1

Sgms2, Phosphatidylcholine:ceramide cholinephosphotransferase 2, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms2Q9D4B1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sgms2Q9D4B1 Gm15039-201ENSMUST00000118914 875 ntBASIC20.55■□□□□ 0.88
Sgms2Q9D4B1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sgms2Q9D4B1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sgms2Q9D4B1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sgms2Q9D4B1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sgms2Q9D4B1 Gm11175-201ENSMUST00000116172 543 ntBASIC20.53■□□□□ 0.88
Sgms2Q9D4B1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Sgms2Q9D4B1 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sgms2Q9D4B1 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sgms2Q9D4B1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sgms2Q9D4B1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sgms2Q9D4B1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sgms2Q9D4B1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sgms2Q9D4B1 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sgms2Q9D4B1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sgms2Q9D4B1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sgms2Q9D4B1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sgms2Q9D4B1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Sgms2Q9D4B1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sgms2Q9D4B1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sgms2Q9D4B1 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.46■□□□□ 0.87
Sgms2Q9D4B1 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sgms2Q9D4B1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sgms2Q9D4B1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sgms2Q9D4B1 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sgms2Q9D4B1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Sgms2Q9D4B1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.45■□□□□ 0.86
Sgms2Q9D4B1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sgms2Q9D4B1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.44■□□□□ 0.86
Sgms2Q9D4B1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sgms2Q9D4B1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sgms2Q9D4B1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.43■□□□□ 0.86
Sgms2Q9D4B1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sgms2Q9D4B1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sgms2Q9D4B1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.41■□□□□ 0.86
Sgms2Q9D4B1 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.41■□□□□ 0.86
Sgms2Q9D4B1 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Sgms2Q9D4B1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sgms2Q9D4B1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Sgms2Q9D4B1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sgms2Q9D4B1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sgms2Q9D4B1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sgms2Q9D4B1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sgms2Q9D4B1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sgms2Q9D4B1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sgms2Q9D4B1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Sgms2Q9D4B1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgms2Q9D4B1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgms2Q9D4B1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sgms2Q9D4B1 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sgms2Q9D4B1 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sgms2Q9D4B1 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.36■□□□□ 0.85
Sgms2Q9D4B1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sgms2Q9D4B1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sgms2Q9D4B1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.35■□□□□ 0.85
Sgms2Q9D4B1 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Sgms2Q9D4B1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sgms2Q9D4B1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.34■□□□□ 0.85
Sgms2Q9D4B1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sgms2Q9D4B1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sgms2Q9D4B1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sgms2Q9D4B1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 Amer2-203ENSMUST00000225247 2662 ntBASIC20.31■□□□□ 0.84
Sgms2Q9D4B1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms2Q9D4B1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms2Q9D4B1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.3■□□□□ 0.84
Sgms2Q9D4B1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms2Q9D4B1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms2Q9D4B1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sgms2Q9D4B1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms2Q9D4B1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sgms2Q9D4B1 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Sgms2Q9D4B1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Sgms2Q9D4B1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms2Q9D4B1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms2Q9D4B1 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sgms2Q9D4B1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgms2Q9D4B1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgms2Q9D4B1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sgms2Q9D4B1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms2Q9D4B1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sgms2Q9D4B1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms2Q9D4B1 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms2Q9D4B1 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms2Q9D4B1 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms2Q9D4B1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sgms2Q9D4B1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms2Q9D4B1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Sgms2Q9D4B1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms2Q9D4B1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sgms2Q9D4B1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sgms2Q9D4B1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sgms2Q9D4B1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
Sgms2Q9D4B1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 247.3 ms