Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Rtn4Q99P72 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
Rtn4Q99P72 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
Rtn4Q99P72 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Rtn4Q99P72 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rtn4Q99P72 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rtn4Q99P72 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rtn4Q99P72 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rtn4Q99P72 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rtn4Q99P72 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rtn4Q99P72 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.47■■■□□ 2.47
Rtn4Q99P72 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Rtn4Q99P72 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtn4Q99P72 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.46■■■□□ 2.47
Rtn4Q99P72 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Rtn4Q99P72 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Rtn4Q99P72 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Rtn4Q99P72 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC30.44■■■□□ 2.46
Rtn4Q99P72 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Rtn4Q99P72 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Rtn4Q99P72 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Rtn4Q99P72 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC30.39■■■□□ 2.46
Rtn4Q99P72 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Rtn4Q99P72 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Rtn4Q99P72 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Rtn4Q99P72 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
Rtn4Q99P72 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
Rtn4Q99P72 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rtn4Q99P72 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Rtn4Q99P72 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Rtn4Q99P72 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.35■■■□□ 2.45
Rtn4Q99P72 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Rtn4Q99P72 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Rtn4Q99P72 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rtn4Q99P72 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC30.33■■■□□ 2.45
Rtn4Q99P72 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC30.33■■■□□ 2.45
Rtn4Q99P72 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
Rtn4Q99P72 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
Rtn4Q99P72 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rtn4Q99P72 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Rtn4Q99P72 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rtn4Q99P72 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.31■■■□□ 2.44
Rtn4Q99P72 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Rtn4Q99P72 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rtn4Q99P72 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Rtn4Q99P72 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Rtn4Q99P72 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Rtn4Q99P72 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Rtn4Q99P72 Gm6345-201ENSMUST00000180378 1691 ntBASIC30.28■■■□□ 2.44
Rtn4Q99P72 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.28■■■□□ 2.44
Rtn4Q99P72 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC30.27■■■□□ 2.44
Rtn4Q99P72 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rtn4Q99P72 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Rtn4Q99P72 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Rtn4Q99P72 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
Rtn4Q99P72 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.24■■■□□ 2.43
Rtn4Q99P72 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Rtn4Q99P72 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rtn4Q99P72 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Rtn4Q99P72 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.2■■■□□ 2.43
Rtn4Q99P72 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Rtn4Q99P72 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtn4Q99P72 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.19■■■□□ 2.42
Rtn4Q99P72 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Rtn4Q99P72 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Rtn4Q99P72 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
Rtn4Q99P72 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.17■■■□□ 2.42
Rtn4Q99P72 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
Rtn4Q99P72 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Rtn4Q99P72 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Rtn4Q99P72 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Rtn4Q99P72 Gm7432-201ENSMUST00000210343 879 ntBASIC30.14■■■□□ 2.42
Rtn4Q99P72 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC30.14■■■□□ 2.42
Rtn4Q99P72 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rtn4Q99P72 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rtn4Q99P72 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
Rtn4Q99P72 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rtn4Q99P72 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rtn4Q99P72 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rtn4Q99P72 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Rtn4Q99P72 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Rtn4Q99P72 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC30.09■■■□□ 2.41
Rtn4Q99P72 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Rtn4Q99P72 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Rtn4Q99P72 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Rtn4Q99P72 AC153504.1-201ENSMUST00000218379 2290 ntBASIC30.06■■■□□ 2.4
Rtn4Q99P72 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rtn4Q99P72 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Rtn4Q99P72 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.05■■■□□ 2.4
Rtn4Q99P72 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC30.05■■■□□ 2.4
Rtn4Q99P72 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Rtn4Q99P72 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Rtn4Q99P72 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rtn4Q99P72 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rtn4Q99P72 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.03■■■□□ 2.4
Rtn4Q99P72 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC30.02■■■□□ 2.4
Rtn4Q99P72 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rtn4Q99P72 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC30■■■□□ 2.39
Rtn4Q99P72 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rtn4Q99P72 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms