Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC24,54■■□□□ 1,52
Cacna1dQ99246 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24,53■■□□□ 1,52
Cacna1dQ99246 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Cacna1dQ99246 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24,53■■□□□ 1,52
Cacna1dQ99246 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC24,52■■□□□ 1,52
Cacna1dQ99246 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24,52■■□□□ 1,52
Cacna1dQ99246 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC24,52■■□□□ 1,52
Cacna1dQ99246 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24,52■■□□□ 1,52
Cacna1dQ99246 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24,51■■□□□ 1,51
Cacna1dQ99246 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24,51■■□□□ 1,51
Cacna1dQ99246 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC24,5■■□□□ 1,51
Cacna1dQ99246 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24,49■■□□□ 1,51
Cacna1dQ99246 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24,49■■□□□ 1,51
Cacna1dQ99246 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
Cacna1dQ99246 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC24,46■■□□□ 1,51
Cacna1dQ99246 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC24,46■■□□□ 1,51
Cacna1dQ99246 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24,45■■□□□ 1,5
Cacna1dQ99246 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,45■■□□□ 1,5
Cacna1dQ99246 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24,44■■□□□ 1,5
Cacna1dQ99246 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC24,44■■□□□ 1,5
Cacna1dQ99246 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24,44■■□□□ 1,5
Cacna1dQ99246 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24,44■■□□□ 1,5
Cacna1dQ99246 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24,43■■□□□ 1,5
Cacna1dQ99246 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Cacna1dQ99246 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Cacna1dQ99246 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Cacna1dQ99246 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC24,43■■□□□ 1,5
Cacna1dQ99246 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24,42■■□□□ 1,5
Cacna1dQ99246 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24,42■■□□□ 1,5
Cacna1dQ99246 Gm6345-201ENSMUST00000180378 1691 ntBASIC24,41■■□□□ 1,5
Cacna1dQ99246 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24,41■■□□□ 1,5
Cacna1dQ99246 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24,41■■□□□ 1,5
Cacna1dQ99246 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Cacna1dQ99246 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24,4■■□□□ 1,5
Cacna1dQ99246 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24,39■■□□□ 1,49
Cacna1dQ99246 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24,39■■□□□ 1,49
Cacna1dQ99246 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24,38■■□□□ 1,49
Cacna1dQ99246 Gm11599-201ENSMUST00000118720 878 ntBASIC24,37■■□□□ 1,49
Cacna1dQ99246 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC24,36■■□□□ 1,49
Cacna1dQ99246 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24,36■■□□□ 1,49
Cacna1dQ99246 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24,35■■□□□ 1,49
Cacna1dQ99246 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24,34■■□□□ 1,49
Cacna1dQ99246 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24,34■■□□□ 1,49
Cacna1dQ99246 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24,34■■□□□ 1,49
Cacna1dQ99246 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24,34■■□□□ 1,49
Cacna1dQ99246 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24,33■■□□□ 1,48
Cacna1dQ99246 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24,31■■□□□ 1,48
Cacna1dQ99246 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC24,3■■□□□ 1,48
Cacna1dQ99246 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24,3■■□□□ 1,48
Cacna1dQ99246 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24,3■■□□□ 1,48
Cacna1dQ99246 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC24,29■■□□□ 1,48
Cacna1dQ99246 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC24,29■■□□□ 1,48
Cacna1dQ99246 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC24,28■■□□□ 1,48
Cacna1dQ99246 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24,28■■□□□ 1,48
Cacna1dQ99246 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
Cacna1dQ99246 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24,27■■□□□ 1,48
Cacna1dQ99246 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC24,27■■□□□ 1,48
Cacna1dQ99246 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24,27■■□□□ 1,48
Cacna1dQ99246 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24,26■■□□□ 1,47
Cacna1dQ99246 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24,25■■□□□ 1,47
Cacna1dQ99246 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24,25■■□□□ 1,47
Cacna1dQ99246 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24,25■■□□□ 1,47
Cacna1dQ99246 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC24,24■■□□□ 1,47
Cacna1dQ99246 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24,24■■□□□ 1,47
Cacna1dQ99246 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24,24■■□□□ 1,47
Cacna1dQ99246 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Cacna1dQ99246 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24,24■■□□□ 1,47
Cacna1dQ99246 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Cacna1dQ99246 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC24,23■■□□□ 1,47
Cacna1dQ99246 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC24,22■■□□□ 1,47
Cacna1dQ99246 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Cacna1dQ99246 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24,22■■□□□ 1,47
Cacna1dQ99246 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC24,22■■□□□ 1,47
Cacna1dQ99246 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24,21■■□□□ 1,47
Cacna1dQ99246 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24,21■■□□□ 1,47
Cacna1dQ99246 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24,21■■□□□ 1,47
Cacna1dQ99246 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC24,21■■□□□ 1,47
Cacna1dQ99246 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24,2■■□□□ 1,47
Cacna1dQ99246 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24,2■■□□□ 1,46
Cacna1dQ99246 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC24,19■■□□□ 1,46
Cacna1dQ99246 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Cacna1dQ99246 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Cacna1dQ99246 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24,19■■□□□ 1,46
Cacna1dQ99246 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24,18■■□□□ 1,46
Cacna1dQ99246 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC24,18■■□□□ 1,46
Cacna1dQ99246 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC24,18■■□□□ 1,46
Cacna1dQ99246 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24,18■■□□□ 1,46
Cacna1dQ99246 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC24,17■■□□□ 1,46
Cacna1dQ99246 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24,17■■□□□ 1,46
Cacna1dQ99246 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC24,17■■□□□ 1,46
Cacna1dQ99246 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24,15■■□□□ 1,46
Cacna1dQ99246 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC24,15■■□□□ 1,46
Cacna1dQ99246 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24,15■■□□□ 1,46
Cacna1dQ99246 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24,13■■□□□ 1,45
Cacna1dQ99246 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24,13■■□□□ 1,45
Cacna1dQ99246 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,13■■□□□ 1,45
Cacna1dQ99246 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC24,13■■□□□ 1,45
Cacna1dQ99246 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24,12■■□□□ 1,45
Cacna1dQ99246 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Cacna1dQ99246 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24,12■■□□□ 1,45
Retrieved 100 of 76,532 protein–RNA pairs in 41,5 ms