Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Col20a1Q923P0 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Col20a1Q923P0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Col20a1Q923P0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.26■■■□□ 2.28
Col20a1Q923P0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Col20a1Q923P0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Col20a1Q923P0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Col20a1Q923P0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col20a1Q923P0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col20a1Q923P0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col20a1Q923P0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col20a1Q923P0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Col20a1Q923P0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
Col20a1Q923P0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col20a1Q923P0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.2■■■□□ 2.27
Col20a1Q923P0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.2■■■□□ 2.27
Col20a1Q923P0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Col20a1Q923P0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Col20a1Q923P0 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col20a1Q923P0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Col20a1Q923P0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.17■■■□□ 2.26
Col20a1Q923P0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.17■■■□□ 2.26
Col20a1Q923P0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
Col20a1Q923P0 Gm5987-201ENSMUST00000196433 1151 ntBASIC29.15■■■□□ 2.26
Col20a1Q923P0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Col20a1Q923P0 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Col20a1Q923P0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Col20a1Q923P0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC29.13■■■□□ 2.25
Col20a1Q923P0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.12■■■□□ 2.25
Col20a1Q923P0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Col20a1Q923P0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.1■■■□□ 2.25
Col20a1Q923P0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
Col20a1Q923P0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Col20a1Q923P0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Col20a1Q923P0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Col20a1Q923P0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC29.07■■■□□ 2.24
Col20a1Q923P0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
Col20a1Q923P0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Col20a1Q923P0 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col20a1Q923P0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col20a1Q923P0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.06■■■□□ 2.24
Col20a1Q923P0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.06■■■□□ 2.24
Col20a1Q923P0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col20a1Q923P0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Col20a1Q923P0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.04■■■□□ 2.24
Col20a1Q923P0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.04■■■□□ 2.24
Col20a1Q923P0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Col20a1Q923P0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
Col20a1Q923P0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Col20a1Q923P0 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.02■■■□□ 2.24
Col20a1Q923P0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Col20a1Q923P0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
Col20a1Q923P0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Col20a1Q923P0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC29■■■□□ 2.23
Col20a1Q923P0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Col20a1Q923P0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Col20a1Q923P0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Col20a1Q923P0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.99■■■□□ 2.23
Col20a1Q923P0 Gm7432-201ENSMUST00000210343 879 ntBASIC28.98■■■□□ 2.23
Col20a1Q923P0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col20a1Q923P0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Col20a1Q923P0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Col20a1Q923P0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Col20a1Q923P0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Col20a1Q923P0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Col20a1Q923P0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.97■■■□□ 2.23
Col20a1Q923P0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Col20a1Q923P0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.96■■■□□ 2.23
Col20a1Q923P0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.94■■■□□ 2.22
Col20a1Q923P0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Col20a1Q923P0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
Col20a1Q923P0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.92■■■□□ 2.22
Col20a1Q923P0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.92■■■□□ 2.22
Col20a1Q923P0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.92■■■□□ 2.22
Col20a1Q923P0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Col20a1Q923P0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Col20a1Q923P0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Col20a1Q923P0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
Col20a1Q923P0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC28.89■■■□□ 2.21
Col20a1Q923P0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.88■■■□□ 2.21
Col20a1Q923P0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Col20a1Q923P0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Col20a1Q923P0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col20a1Q923P0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Col20a1Q923P0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Col20a1Q923P0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC28.86■■■□□ 2.21
Col20a1Q923P0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Col20a1Q923P0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Col20a1Q923P0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Col20a1Q923P0 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.84■■■□□ 2.21
Col20a1Q923P0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Col20a1Q923P0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.84■■■□□ 2.21
Col20a1Q923P0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Col20a1Q923P0 Gm30023-201ENSMUST00000197970 889 ntBASIC28.83■■■□□ 2.21
Col20a1Q923P0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Col20a1Q923P0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col20a1Q923P0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Col20a1Q923P0 Zxda-201ENSMUST00000117281 2621 ntBASIC28.82■■■□□ 2.2
Col20a1Q923P0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Col20a1Q923P0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms