Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tram1Q91V04 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tram1Q91V04 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.77■□□□□ 0.91
Tram1Q91V04 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tram1Q91V04 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Tram1Q91V04 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tram1Q91V04 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tram1Q91V04 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tram1Q91V04 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.75■□□□□ 0.91
Tram1Q91V04 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tram1Q91V04 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.75■□□□□ 0.91
Tram1Q91V04 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Tram1Q91V04 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tram1Q91V04 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.74■□□□□ 0.91
Tram1Q91V04 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tram1Q91V04 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tram1Q91V04 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tram1Q91V04 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.72■□□□□ 0.91
Tram1Q91V04 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tram1Q91V04 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tram1Q91V04 Gm27322-201ENSMUST00000184007 104 ntBASIC20.7■□□□□ 0.9
Tram1Q91V04 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tram1Q91V04 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1Q91V04 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Tram1Q91V04 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1Q91V04 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Tram1Q91V04 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
Tram1Q91V04 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tram1Q91V04 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1Q91V04 Gm25262-201ENSMUST00000174934 133 ntBASIC20.68■□□□□ 0.9
Tram1Q91V04 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tram1Q91V04 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Tram1Q91V04 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tram1Q91V04 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
Tram1Q91V04 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Tram1Q91V04 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tram1Q91V04 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Tram1Q91V04 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tram1Q91V04 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tram1Q91V04 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tram1Q91V04 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1Q91V04 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Tram1Q91V04 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1Q91V04 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1Q91V04 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tram1Q91V04 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.63■□□□□ 0.89
Tram1Q91V04 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tram1Q91V04 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tram1Q91V04 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.62■□□□□ 0.89
Tram1Q91V04 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1Q91V04 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1Q91V04 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tram1Q91V04 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1Q91V04 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1Q91V04 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.61■□□□□ 0.89
Tram1Q91V04 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tram1Q91V04 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tram1Q91V04 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tram1Q91V04 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tram1Q91V04 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tram1Q91V04 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tram1Q91V04 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Tram1Q91V04 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tram1Q91V04 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tram1Q91V04 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tram1Q91V04 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tram1Q91V04 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tram1Q91V04 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tram1Q91V04 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tram1Q91V04 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tram1Q91V04 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tram1Q91V04 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Tram1Q91V04 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tram1Q91V04 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Tram1Q91V04 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.52■□□□□ 0.87
Tram1Q91V04 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tram1Q91V04 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tram1Q91V04 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tram1Q91V04 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tram1Q91V04 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tram1Q91V04 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tram1Q91V04 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tram1Q91V04 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tram1Q91V04 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.49■□□□□ 0.87
Tram1Q91V04 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tram1Q91V04 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tram1Q91V04 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tram1Q91V04 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tram1Q91V04 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tram1Q91V04 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tram1Q91V04 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tram1Q91V04 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tram1Q91V04 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tram1Q91V04 Peli2-204ENSMUST00000226513 1320 ntBASIC20.47■□□□□ 0.87
Tram1Q91V04 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tram1Q91V04 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tram1Q91V04 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tram1Q91V04 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tram1Q91V04 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tram1Q91V04 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms