Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.46■■□□□ 1.99
Atp2a1Q8R429 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.99
Atp2a1Q8R429 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Atp2a1Q8R429 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Atp2a1Q8R429 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Atp2a1Q8R429 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Atp2a1Q8R429 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Atp2a1Q8R429 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.36■■□□□ 1.97
Atp2a1Q8R429 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Atp2a1Q8R429 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Atp2a1Q8R429 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Atp2a1Q8R429 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Atp2a1Q8R429 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC27.34■■□□□ 1.97
Atp2a1Q8R429 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
Atp2a1Q8R429 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Atp2a1Q8R429 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Atp2a1Q8R429 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Atp2a1Q8R429 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.32■■□□□ 1.96
Atp2a1Q8R429 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atp2a1Q8R429 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atp2a1Q8R429 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Atp2a1Q8R429 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Atp2a1Q8R429 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Atp2a1Q8R429 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Atp2a1Q8R429 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Atp2a1Q8R429 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Atp2a1Q8R429 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
Atp2a1Q8R429 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.27■■□□□ 1.96
Atp2a1Q8R429 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Atp2a1Q8R429 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
Atp2a1Q8R429 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Atp2a1Q8R429 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Atp2a1Q8R429 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Atp2a1Q8R429 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Atp2a1Q8R429 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp2a1Q8R429 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Atp2a1Q8R429 Gm7432-201ENSMUST00000210343 879 ntBASIC27.23■■□□□ 1.95
Atp2a1Q8R429 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Atp2a1Q8R429 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Atp2a1Q8R429 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Atp2a1Q8R429 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.21■■□□□ 1.95
Atp2a1Q8R429 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC27.2■■□□□ 1.94
Atp2a1Q8R429 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Atp2a1Q8R429 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Atp2a1Q8R429 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Atp2a1Q8R429 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Atp2a1Q8R429 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Atp2a1Q8R429 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Atp2a1Q8R429 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Atp2a1Q8R429 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.15■■□□□ 1.94
Atp2a1Q8R429 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Atp2a1Q8R429 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Atp2a1Q8R429 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Atp2a1Q8R429 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Atp2a1Q8R429 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.13■■□□□ 1.93
Atp2a1Q8R429 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.13■■□□□ 1.93
Atp2a1Q8R429 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Atp2a1Q8R429 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.11■■□□□ 1.93
Atp2a1Q8R429 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Atp2a1Q8R429 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Atp2a1Q8R429 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.09■■□□□ 1.93
Atp2a1Q8R429 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
Atp2a1Q8R429 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.09■■□□□ 1.93
Atp2a1Q8R429 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Atp2a1Q8R429 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Atp2a1Q8R429 Zxda-201ENSMUST00000117281 2621 ntBASIC27.07■■□□□ 1.92
Atp2a1Q8R429 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.06■■□□□ 1.92
Atp2a1Q8R429 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Atp2a1Q8R429 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
Atp2a1Q8R429 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
Atp2a1Q8R429 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Atp2a1Q8R429 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Atp2a1Q8R429 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Atp2a1Q8R429 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.04■■□□□ 1.92
Atp2a1Q8R429 Gm11599-201ENSMUST00000118720 878 ntBASIC27.04■■□□□ 1.92
Atp2a1Q8R429 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.04■■□□□ 1.92
Atp2a1Q8R429 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.03■■□□□ 1.92
Atp2a1Q8R429 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Atp2a1Q8R429 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Atp2a1Q8R429 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Atp2a1Q8R429 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Atp2a1Q8R429 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Atp2a1Q8R429 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Atp2a1Q8R429 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Atp2a1Q8R429 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Atp2a1Q8R429 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Atp2a1Q8R429 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Atp2a1Q8R429 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Atp2a1Q8R429 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.98■■□□□ 1.91
Atp2a1Q8R429 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Atp2a1Q8R429 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.98■■□□□ 1.91
Atp2a1Q8R429 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.97■■□□□ 1.91
Atp2a1Q8R429 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC26.97■■□□□ 1.91
Atp2a1Q8R429 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Atp2a1Q8R429 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.97■■□□□ 1.91
Atp2a1Q8R429 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC26.97■■□□□ 1.91
Atp2a1Q8R429 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
Atp2a1Q8R429 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.96■■□□□ 1.91
Atp2a1Q8R429 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
Atp2a1Q8R429 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms