Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn1Q8K0T0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Rtn1Q8K0T0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Rtn1Q8K0T0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rtn1Q8K0T0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rtn1Q8K0T0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Rtn1Q8K0T0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Rtn1Q8K0T0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rtn1Q8K0T0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC28.29■■■□□ 2.12
Rtn1Q8K0T0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rtn1Q8K0T0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Rtn1Q8K0T0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rtn1Q8K0T0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
Rtn1Q8K0T0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Rtn1Q8K0T0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC28.25■■■□□ 2.11
Rtn1Q8K0T0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Rtn1Q8K0T0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC28.25■■■□□ 2.11
Rtn1Q8K0T0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC28.25■■■□□ 2.11
Rtn1Q8K0T0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rtn1Q8K0T0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rtn1Q8K0T0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Rtn1Q8K0T0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Rtn1Q8K0T0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rtn1Q8K0T0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rtn1Q8K0T0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
Rtn1Q8K0T0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rtn1Q8K0T0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rtn1Q8K0T0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rtn1Q8K0T0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rtn1Q8K0T0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Rtn1Q8K0T0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.16■■■□□ 2.1
Rtn1Q8K0T0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rtn1Q8K0T0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rtn1Q8K0T0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rtn1Q8K0T0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC28.14■■■□□ 2.1
Rtn1Q8K0T0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rtn1Q8K0T0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.12■■■□□ 2.09
Rtn1Q8K0T0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.12■■■□□ 2.09
Rtn1Q8K0T0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rtn1Q8K0T0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.12■■■□□ 2.09
Rtn1Q8K0T0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rtn1Q8K0T0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Rtn1Q8K0T0 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.09■■■□□ 2.09
Rtn1Q8K0T0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
Rtn1Q8K0T0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.08■■■□□ 2.09
Rtn1Q8K0T0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Rtn1Q8K0T0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Rtn1Q8K0T0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Rtn1Q8K0T0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rtn1Q8K0T0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Rtn1Q8K0T0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Rtn1Q8K0T0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.04■■■□□ 2.08
Rtn1Q8K0T0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.04■■■□□ 2.08
Rtn1Q8K0T0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.04■■■□□ 2.08
Rtn1Q8K0T0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Rtn1Q8K0T0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Rtn1Q8K0T0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.02■■■□□ 2.08
Rtn1Q8K0T0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn1Q8K0T0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn1Q8K0T0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Rtn1Q8K0T0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Rtn1Q8K0T0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Rtn1Q8K0T0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
Rtn1Q8K0T0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rtn1Q8K0T0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Rtn1Q8K0T0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Rtn1Q8K0T0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.98■■■□□ 2.07
Rtn1Q8K0T0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.98■■■□□ 2.07
Rtn1Q8K0T0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Rtn1Q8K0T0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Rtn1Q8K0T0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Rtn1Q8K0T0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.07
Rtn1Q8K0T0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Rtn1Q8K0T0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rtn1Q8K0T0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Rtn1Q8K0T0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rtn1Q8K0T0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC27.92■■■□□ 2.06
Rtn1Q8K0T0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Rtn1Q8K0T0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Rtn1Q8K0T0 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.89■■■□□ 2.06
Rtn1Q8K0T0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.89■■■□□ 2.06
Rtn1Q8K0T0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rtn1Q8K0T0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Rtn1Q8K0T0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Rtn1Q8K0T0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Rtn1Q8K0T0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.85■■■□□ 2.05
Rtn1Q8K0T0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rtn1Q8K0T0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.85■■■□□ 2.05
Rtn1Q8K0T0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Rtn1Q8K0T0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rtn1Q8K0T0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Rtn1Q8K0T0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Rtn1Q8K0T0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Rtn1Q8K0T0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Rtn1Q8K0T0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rtn1Q8K0T0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtn1Q8K0T0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Rtn1Q8K0T0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtn1Q8K0T0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
Rtn1Q8K0T0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 152.8 ms