Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rftn2Q8CHX7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rftn2Q8CHX7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rftn2Q8CHX7 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rftn2Q8CHX7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rftn2Q8CHX7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Rftn2Q8CHX7 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.32■■□□□ 1.8
Rftn2Q8CHX7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Rftn2Q8CHX7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Rftn2Q8CHX7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC26.31■■□□□ 1.8
Rftn2Q8CHX7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Rftn2Q8CHX7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Rftn2Q8CHX7 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.29■■□□□ 1.8
Rftn2Q8CHX7 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rftn2Q8CHX7 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Rftn2Q8CHX7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.26■■□□□ 1.79
Rftn2Q8CHX7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rftn2Q8CHX7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rftn2Q8CHX7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rftn2Q8CHX7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rftn2Q8CHX7 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rftn2Q8CHX7 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.22■■□□□ 1.79
Rftn2Q8CHX7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rftn2Q8CHX7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.21■■□□□ 1.79
Rftn2Q8CHX7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.21■■□□□ 1.79
Rftn2Q8CHX7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Rftn2Q8CHX7 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.2■■□□□ 1.78
Rftn2Q8CHX7 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.2■■□□□ 1.78
Rftn2Q8CHX7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rftn2Q8CHX7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rftn2Q8CHX7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.18■■□□□ 1.78
Rftn2Q8CHX7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rftn2Q8CHX7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Rftn2Q8CHX7 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Rftn2Q8CHX7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Rftn2Q8CHX7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rftn2Q8CHX7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Rftn2Q8CHX7 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Rftn2Q8CHX7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rftn2Q8CHX7 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Rftn2Q8CHX7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Rftn2Q8CHX7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
Rftn2Q8CHX7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Rftn2Q8CHX7 Zxda-201ENSMUST00000117281 2621 ntBASIC26.14■■□□□ 1.78
Rftn2Q8CHX7 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.14■■□□□ 1.78
Rftn2Q8CHX7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.12■■□□□ 1.77
Rftn2Q8CHX7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Rftn2Q8CHX7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rftn2Q8CHX7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Rftn2Q8CHX7 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Rftn2Q8CHX7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Rftn2Q8CHX7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Rftn2Q8CHX7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Rftn2Q8CHX7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Rftn2Q8CHX7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Rftn2Q8CHX7 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Rftn2Q8CHX7 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Rftn2Q8CHX7 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rftn2Q8CHX7 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rftn2Q8CHX7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Rftn2Q8CHX7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
Rftn2Q8CHX7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.05■■□□□ 1.76
Rftn2Q8CHX7 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.04■■□□□ 1.76
Rftn2Q8CHX7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Rftn2Q8CHX7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.04■■□□□ 1.76
Rftn2Q8CHX7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Rftn2Q8CHX7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.03■■□□□ 1.76
Rftn2Q8CHX7 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Rftn2Q8CHX7 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rftn2Q8CHX7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Rftn2Q8CHX7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rftn2Q8CHX7 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rftn2Q8CHX7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rftn2Q8CHX7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rftn2Q8CHX7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rftn2Q8CHX7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rftn2Q8CHX7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26■■□□□ 1.75
Rftn2Q8CHX7 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rftn2Q8CHX7 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.99■■□□□ 1.75
Rftn2Q8CHX7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.98■■□□□ 1.75
Rftn2Q8CHX7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rftn2Q8CHX7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rftn2Q8CHX7 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rftn2Q8CHX7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.95■■□□□ 1.74
Rftn2Q8CHX7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rftn2Q8CHX7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rftn2Q8CHX7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.95■■□□□ 1.74
Rftn2Q8CHX7 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.94■■□□□ 1.74
Rftn2Q8CHX7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.94■■□□□ 1.74
Rftn2Q8CHX7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.94■■□□□ 1.74
Rftn2Q8CHX7 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.94■■□□□ 1.74
Rftn2Q8CHX7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rftn2Q8CHX7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rftn2Q8CHX7 Gm7432-201ENSMUST00000210343 879 ntBASIC25.93■■□□□ 1.74
Rftn2Q8CHX7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.93■■□□□ 1.74
Rftn2Q8CHX7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Rftn2Q8CHX7 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.92■■□□□ 1.74
Rftn2Q8CHX7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Rftn2Q8CHX7 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.9■■□□□ 1.74
Rftn2Q8CHX7 Gm30023-201ENSMUST00000197970 889 ntBASIC25.9■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms