Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.51■■■□□ 2.8
Ccne1Q61457 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC32.51■■■□□ 2.79
Ccne1Q61457 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Ccne1Q61457 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Ccne1Q61457 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC32.5■■■□□ 2.79
Ccne1Q61457 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Ccne1Q61457 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccne1Q61457 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
Ccne1Q61457 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Ccne1Q61457 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccne1Q61457 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC32.48■■■□□ 2.79
Ccne1Q61457 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
Ccne1Q61457 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Ccne1Q61457 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Ccne1Q61457 Gm6345-201ENSMUST00000180378 1691 ntBASIC32.44■■■□□ 2.78
Ccne1Q61457 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC32.44■■■□□ 2.78
Ccne1Q61457 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccne1Q61457 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Ccne1Q61457 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
Ccne1Q61457 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ccne1Q61457 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Ccne1Q61457 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Ccne1Q61457 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC32.4■■■□□ 2.78
Ccne1Q61457 Gm11599-201ENSMUST00000118720 878 ntBASIC32.39■■■□□ 2.78
Ccne1Q61457 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Ccne1Q61457 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Ccne1Q61457 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
Ccne1Q61457 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccne1Q61457 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Ccne1Q61457 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Ccne1Q61457 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccne1Q61457 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Ccne1Q61457 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.35■■■□□ 2.77
Ccne1Q61457 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Ccne1Q61457 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Ccne1Q61457 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC32.34■■■□□ 2.77
Ccne1Q61457 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.33■■■□□ 2.77
Ccne1Q61457 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.33■■■□□ 2.77
Ccne1Q61457 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ccne1Q61457 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
Ccne1Q61457 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32.3■■■□□ 2.76
Ccne1Q61457 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.3■■■□□ 2.76
Ccne1Q61457 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.29■■■□□ 2.76
Ccne1Q61457 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Ccne1Q61457 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Ccne1Q61457 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.26■■■□□ 2.75
Ccne1Q61457 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Ccne1Q61457 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.24■■■□□ 2.75
Ccne1Q61457 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
Ccne1Q61457 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
Ccne1Q61457 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
Ccne1Q61457 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC32.22■■■□□ 2.75
Ccne1Q61457 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Ccne1Q61457 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Ccne1Q61457 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Ccne1Q61457 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.16■■■□□ 2.74
Ccne1Q61457 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.16■■■□□ 2.74
Ccne1Q61457 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Ccne1Q61457 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Ccne1Q61457 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Ccne1Q61457 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Ccne1Q61457 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC32.14■■■□□ 2.74
Ccne1Q61457 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
Ccne1Q61457 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ccne1Q61457 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ccne1Q61457 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
Ccne1Q61457 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
Ccne1Q61457 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
Ccne1Q61457 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ccne1Q61457 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Ccne1Q61457 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Ccne1Q61457 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccne1Q61457 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccne1Q61457 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Ccne1Q61457 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.09■■■□□ 2.73
Ccne1Q61457 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.08■■■□□ 2.73
Ccne1Q61457 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ccne1Q61457 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Ccne1Q61457 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.07■■■□□ 2.72
Ccne1Q61457 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Ccne1Q61457 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.05■■■□□ 2.72
Ccne1Q61457 Gm30023-201ENSMUST00000197970 889 ntBASIC32.05■■■□□ 2.72
Ccne1Q61457 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Ccne1Q61457 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
Ccne1Q61457 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC32.03■■■□□ 2.72
Ccne1Q61457 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Ccne1Q61457 Gm11175-201ENSMUST00000116172 543 ntBASIC32.01■■■□□ 2.71
Ccne1Q61457 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC32.01■■■□□ 2.71
Ccne1Q61457 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Ccne1Q61457 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC32■■■□□ 2.71
Ccne1Q61457 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC32■■■□□ 2.71
Ccne1Q61457 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.99■■■□□ 2.71
Ccne1Q61457 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ccne1Q61457 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
Ccne1Q61457 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ccne1Q61457 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC31.97■■■□□ 2.71
Ccne1Q61457 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Ccne1Q61457 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Ccne1Q61457 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.95■■■□□ 2.7
Ccne1Q61457 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms