Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.52■■■□□ 2
Cln3Q61124 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Cln3Q61124 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC27.5■■□□□ 1.99
Cln3Q61124 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.49■■□□□ 1.99
Cln3Q61124 Gm11599-201ENSMUST00000118720 878 ntBASIC27.49■■□□□ 1.99
Cln3Q61124 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cln3Q61124 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Cln3Q61124 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Cln3Q61124 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Cln3Q61124 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cln3Q61124 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.46■■□□□ 1.99
Cln3Q61124 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Cln3Q61124 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Cln3Q61124 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
Cln3Q61124 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Cln3Q61124 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.43■■□□□ 1.98
Cln3Q61124 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Cln3Q61124 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cln3Q61124 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.41■■□□□ 1.98
Cln3Q61124 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Cln3Q61124 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cln3Q61124 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC27.4■■□□□ 1.98
Cln3Q61124 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Cln3Q61124 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Cln3Q61124 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Cln3Q61124 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.37■■□□□ 1.97
Cln3Q61124 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.37■■□□□ 1.97
Cln3Q61124 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Cln3Q61124 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
Cln3Q61124 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.36■■□□□ 1.97
Cln3Q61124 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cln3Q61124 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC27.34■■□□□ 1.97
Cln3Q61124 Gm6345-201ENSMUST00000180378 1691 ntBASIC27.34■■□□□ 1.97
Cln3Q61124 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cln3Q61124 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Cln3Q61124 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cln3Q61124 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Cln3Q61124 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cln3Q61124 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cln3Q61124 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Cln3Q61124 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Cln3Q61124 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC27.31■■□□□ 1.96
Cln3Q61124 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Cln3Q61124 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Cln3Q61124 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC27.3■■□□□ 1.96
Cln3Q61124 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cln3Q61124 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cln3Q61124 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cln3Q61124 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Cln3Q61124 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Cln3Q61124 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Cln3Q61124 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Cln3Q61124 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.27■■□□□ 1.96
Cln3Q61124 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Cln3Q61124 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
Cln3Q61124 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Cln3Q61124 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Cln3Q61124 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Cln3Q61124 Gm11175-201ENSMUST00000116172 543 ntBASIC27.24■■□□□ 1.95
Cln3Q61124 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
Cln3Q61124 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Cln3Q61124 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Cln3Q61124 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Cln3Q61124 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cln3Q61124 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Cln3Q61124 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Cln3Q61124 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.17■■□□□ 1.94
Cln3Q61124 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.17■■□□□ 1.94
Cln3Q61124 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cln3Q61124 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Cln3Q61124 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Cln3Q61124 Gm30023-201ENSMUST00000197970 889 ntBASIC27.14■■□□□ 1.94
Cln3Q61124 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Cln3Q61124 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Cln3Q61124 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.14■■□□□ 1.93
Cln3Q61124 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Cln3Q61124 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Cln3Q61124 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC27.13■■□□□ 1.93
Cln3Q61124 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.12■■□□□ 1.93
Cln3Q61124 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cln3Q61124 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cln3Q61124 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Cln3Q61124 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cln3Q61124 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cln3Q61124 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Cln3Q61124 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cln3Q61124 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Cln3Q61124 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cln3Q61124 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Cln3Q61124 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cln3Q61124 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cln3Q61124 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Cln3Q61124 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.07■■□□□ 1.92
Cln3Q61124 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC27.06■■□□□ 1.92
Cln3Q61124 Mir6538-201ENSMUST00000183713 110 ntBASIC27.05■■□□□ 1.92
Cln3Q61124 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC27.05■■□□□ 1.92
Cln3Q61124 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Cln3Q61124 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Cln3Q61124 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Cln3Q61124 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms