Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.21■■□□□ 1.79
Znf235Q61116 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
Znf235Q61116 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.2■■□□□ 1.79
Znf235Q61116 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Znf235Q61116 Nkain2-201ENSMUST00000092602 558 ntBASIC26.19■■□□□ 1.78
Znf235Q61116 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Znf235Q61116 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Znf235Q61116 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.18■■□□□ 1.78
Znf235Q61116 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Znf235Q61116 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Znf235Q61116 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Znf235Q61116 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Znf235Q61116 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Znf235Q61116 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Znf235Q61116 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.13■■□□□ 1.77
Znf235Q61116 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Znf235Q61116 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Znf235Q61116 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Znf235Q61116 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Znf235Q61116 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.1■■□□□ 1.77
Znf235Q61116 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Znf235Q61116 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
Znf235Q61116 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.09■■□□□ 1.77
Znf235Q61116 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.09■■□□□ 1.77
Znf235Q61116 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Znf235Q61116 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Znf235Q61116 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.08■■□□□ 1.77
Znf235Q61116 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Znf235Q61116 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Znf235Q61116 Zxda-201ENSMUST00000117281 2621 ntBASIC26.06■■□□□ 1.76
Znf235Q61116 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Znf235Q61116 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.05■■□□□ 1.76
Znf235Q61116 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Znf235Q61116 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.05■■□□□ 1.76
Znf235Q61116 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Znf235Q61116 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Znf235Q61116 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Znf235Q61116 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Znf235Q61116 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Znf235Q61116 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Znf235Q61116 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
Znf235Q61116 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Znf235Q61116 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Znf235Q61116 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Znf235Q61116 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.02■■□□□ 1.76
Znf235Q61116 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Znf235Q61116 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Znf235Q61116 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Znf235Q61116 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.98■■□□□ 1.75
Znf235Q61116 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Znf235Q61116 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Znf235Q61116 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Znf235Q61116 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Znf235Q61116 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Znf235Q61116 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
Znf235Q61116 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Znf235Q61116 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Znf235Q61116 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.94■■□□□ 1.74
Znf235Q61116 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.93■■□□□ 1.74
Znf235Q61116 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.93■■□□□ 1.74
Znf235Q61116 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Znf235Q61116 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
Znf235Q61116 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Znf235Q61116 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Znf235Q61116 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Znf235Q61116 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Znf235Q61116 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Znf235Q61116 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Znf235Q61116 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Znf235Q61116 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Znf235Q61116 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Znf235Q61116 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Znf235Q61116 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Znf235Q61116 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Znf235Q61116 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.86■■□□□ 1.73
Znf235Q61116 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Znf235Q61116 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Znf235Q61116 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.86■■□□□ 1.73
Znf235Q61116 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Znf235Q61116 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.86■■□□□ 1.73
Znf235Q61116 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Znf235Q61116 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.84■■□□□ 1.73
Znf235Q61116 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Znf235Q61116 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.83■■□□□ 1.73
Znf235Q61116 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.83■■□□□ 1.73
Znf235Q61116 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.83■■□□□ 1.72
Znf235Q61116 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Znf235Q61116 Gm30023-201ENSMUST00000197970 889 ntBASIC25.81■■□□□ 1.72
Znf235Q61116 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Znf235Q61116 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Znf235Q61116 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Znf235Q61116 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.8■■□□□ 1.72
Znf235Q61116 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Znf235Q61116 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Znf235Q61116 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Znf235Q61116 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.78■■□□□ 1.72
Znf235Q61116 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.78■■□□□ 1.72
Znf235Q61116 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.78■■□□□ 1.72
Znf235Q61116 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
Znf235Q61116 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms