Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem40Q4FJU9 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tmem40Q4FJU9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem40Q4FJU9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
Tmem40Q4FJU9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem40Q4FJU9 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.74■□□□□ 0.91
Tmem40Q4FJU9 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Tmem40Q4FJU9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tmem40Q4FJU9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem40Q4FJU9 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem40Q4FJU9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Tmem40Q4FJU9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tmem40Q4FJU9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tmem40Q4FJU9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.71■□□□□ 0.91
Tmem40Q4FJU9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem40Q4FJU9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem40Q4FJU9 Gm7432-201ENSMUST00000210343 879 ntBASIC20.71■□□□□ 0.91
Tmem40Q4FJU9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tmem40Q4FJU9 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tmem40Q4FJU9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.7■□□□□ 0.9
Tmem40Q4FJU9 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem40Q4FJU9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem40Q4FJU9 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem40Q4FJU9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem40Q4FJU9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem40Q4FJU9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem40Q4FJU9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem40Q4FJU9 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem40Q4FJU9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem40Q4FJU9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Tmem40Q4FJU9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tmem40Q4FJU9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Tmem40Q4FJU9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Tmem40Q4FJU9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Tmem40Q4FJU9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem40Q4FJU9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem40Q4FJU9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem40Q4FJU9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem40Q4FJU9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem40Q4FJU9 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem40Q4FJU9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem40Q4FJU9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem40Q4FJU9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem40Q4FJU9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.58■□□□□ 0.89
Tmem40Q4FJU9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Tmem40Q4FJU9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem40Q4FJU9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem40Q4FJU9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem40Q4FJU9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem40Q4FJU9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem40Q4FJU9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.56■□□□□ 0.88
Tmem40Q4FJU9 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem40Q4FJU9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem40Q4FJU9 Gm11599-201ENSMUST00000118720 878 ntBASIC20.54■□□□□ 0.88
Tmem40Q4FJU9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmem40Q4FJU9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmem40Q4FJU9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem40Q4FJU9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.52■□□□□ 0.88
Tmem40Q4FJU9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Tmem40Q4FJU9 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem40Q4FJU9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmem40Q4FJU9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem40Q4FJU9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.5■□□□□ 0.87
Tmem40Q4FJU9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tmem40Q4FJU9 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem40Q4FJU9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem40Q4FJU9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.49■□□□□ 0.87
Tmem40Q4FJU9 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem40Q4FJU9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.48■□□□□ 0.87
Tmem40Q4FJU9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem40Q4FJU9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem40Q4FJU9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Tmem40Q4FJU9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem40Q4FJU9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.47■□□□□ 0.87
Tmem40Q4FJU9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.47■□□□□ 0.87
Tmem40Q4FJU9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tmem40Q4FJU9 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem40Q4FJU9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem40Q4FJU9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem40Q4FJU9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem40Q4FJU9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
Tmem40Q4FJU9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem40Q4FJU9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem40Q4FJU9 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem40Q4FJU9 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem40Q4FJU9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.44■□□□□ 0.86
Tmem40Q4FJU9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Tmem40Q4FJU9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.43■□□□□ 0.86
Tmem40Q4FJU9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem40Q4FJU9 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem40Q4FJU9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem40Q4FJU9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tmem40Q4FJU9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.42■□□□□ 0.86
Tmem40Q4FJU9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem40Q4FJU9 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
Tmem40Q4FJU9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem40Q4FJU9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.38■□□□□ 0.85
Tmem40Q4FJU9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem40Q4FJU9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tmem40Q4FJU9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms