Protein–RNA interactions for Protein: Q3E7C1

TFB5, General transcription and DNA repair factor IIH subunit TFB5, yeastyeast

Predicted RBP Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TFB5Q3E7C1 RPC31YNL151C 756 nt7.67□□□□□ -1.18
TFB5Q3E7C1 INH1YDL181W 258 nt7.66□□□□□ -1.18
TFB5Q3E7C1 RBG1YAL036C 1110 nt7.66□□□□□ -1.18
TFB5Q3E7C1 ITR2YOL103W 1830 nt7.66□□□□□ -1.18
TFB5Q3E7C1 SDH5YOL071W 489 nt7.64□□□□□ -1.19
TFB5Q3E7C1 TIP1YBR067C 633 nt7.64□□□□□ -1.19
TFB5Q3E7C1 LSB5YCL034W 1065 nt7.64□□□□□ -1.19
TFB5Q3E7C1 PRY1YJL079C 900 nt7.63□□□□□ -1.19
TFB5Q3E7C1 NSG2YNL156C 900 nt7.62□□□□□ -1.19
TFB5Q3E7C1 SNX3YOR357C 489 nt7.62□□□□□ -1.19
TFB5Q3E7C1 OYE2YHR179W 1203 nt7.61□□□□□ -1.19
TFB5Q3E7C1 EAF3YPR023C 1206 nt7.61□□□□□ -1.19
TFB5Q3E7C1 AAC3YBR085W 924 nt7.61□□□□□ -1.19
TFB5Q3E7C1 YPL222C-AYPL222C-A 246 nt7.6□□□□□ -1.19
TFB5Q3E7C1 DPL1YDR294C 1770 nt7.6□□□□□ -1.19
TFB5Q3E7C1 RPT5YOR117W 1305 nt7.59□□□□□ -1.19
TFB5Q3E7C1 YDR455CYDR455C 309 nt7.59□□□□□ -1.19
TFB5Q3E7C1 GND1YHR183W 1470 nt7.59□□□□□ -1.19
TFB5Q3E7C1 SAM3YPL274W 1764 nt7.59□□□□□ -1.2
TFB5Q3E7C1 RAD23YEL037C 1197 nt7.58□□□□□ -1.2
TFB5Q3E7C1 NME1NME1 340 nt7.58□□□□□ -1.2
TFB5Q3E7C1 URA8YJR103W 1737 nt7.58□□□□□ -1.2
TFB5Q3E7C1 ERG13YML126C 1476 nt7.56□□□□□ -1.2
TFB5Q3E7C1 MEX67YPL169C 1800 nt7.56□□□□□ -1.2
TFB5Q3E7C1 LEU4YNL104C 1860 nt7.55□□□□□ -1.2
TFB5Q3E7C1 YLR173WYLR173W 1827 nt7.55□□□□□ -1.2
TFB5Q3E7C1 SAC7YDR389W 1965 nt7.54□□□□□ -1.2
TFB5Q3E7C1 SMM1YNR015W 1155 nt7.54□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)BtD(GUC)B 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)DtD(GUC)D 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)G1tD(GUC)G1 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)G2tD(GUC)G2 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)I1tD(GUC)I1 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)I2tD(GUC)I2 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)J1tD(GUC)J1 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)J2tD(GUC)J2 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)J3tD(GUC)J3 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)J4tD(GUC)J4 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)KtD(GUC)K 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)L1tD(GUC)L1 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)L2tD(GUC)L2 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)MtD(GUC)M 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 tD(GUC)OtD(GUC)O 72 nt7.53□□□□□ -1.2
TFB5Q3E7C1 LSM5YER146W 282 nt7.53□□□□□ -1.2
TFB5Q3E7C1 YJL118WYJL118W 660 nt7.53□□□□□ -1.2
TFB5Q3E7C1 MIM1YOL026C 342 nt7.53□□□□□ -1.2
TFB5Q3E7C1 RRT8YOL048C 1029 nt7.53□□□□□ -1.2
TFB5Q3E7C1 YMR265CYMR265C 1386 nt7.53□□□□□ -1.2
TFB5Q3E7C1 TPS1YBR126C 1488 nt7.51□□□□□ -1.21
TFB5Q3E7C1 HBS1YKR084C 1836 nt7.51□□□□□ -1.21
TFB5Q3E7C1 tE(CUC)DtE(CUC)D 72 nt7.51□□□□□ -1.21
TFB5Q3E7C1 tE(CUC)ItE(CUC)I 72 nt7.51□□□□□ -1.21
TFB5Q3E7C1 RPN14YGL004C 1254 nt7.51□□□□□ -1.21
TFB5Q3E7C1 LOT5YKL183W 921 nt7.51□□□□□ -1.21
TFB5Q3E7C1 FET5YFL041W 1869 nt7.51□□□□□ -1.21
TFB5Q3E7C1 SNU66YOR308C 1764 nt7.51□□□□□ -1.21
TFB5Q3E7C1 NAS6YGR232W 687 nt7.5□□□□□ -1.21
TFB5Q3E7C1 NPP2YEL016C 1482 nt7.49□□□□□ -1.21
TFB5Q3E7C1 YDR467CYDR467C 327 nt7.49□□□□□ -1.21
TFB5Q3E7C1 RIB3YDR487C 627 nt7.49□□□□□ -1.21
TFB5Q3E7C1 TMA23YMR269W 636 nt7.49□□□□□ -1.21
TFB5Q3E7C1 HAP5YOR358W 729 nt7.49□□□□□ -1.21
TFB5Q3E7C1 RIB7YBR153W 735 nt7.49□□□□□ -1.21
TFB5Q3E7C1 THI72YOR192C 1800 nt7.48□□□□□ -1.21
TFB5Q3E7C1 DDI1YER143W 1287 nt7.48□□□□□ -1.21
TFB5Q3E7C1 YNR064CYNR064C 873 nt7.48□□□□□ -1.21
TFB5Q3E7C1 HXT12YIL170W 1374 nt7.46□□□□□ -1.21
TFB5Q3E7C1 IMO32YGR031W 1029 nt7.45□□□□□ -1.22
TFB5Q3E7C1 ELO1YJL196C 933 nt7.45□□□□□ -1.22
TFB5Q3E7C1 MET8YBR213W 825 nt7.45□□□□□ -1.22
TFB5Q3E7C1 KEL3YPL263C 1956 nt7.44□□□□□ -1.22
TFB5Q3E7C1 MDL2YPL270W 2322 nt7.44□□□□□ -1.22
TFB5Q3E7C1 LSB3YFR024C-A 1380 nt7.44□□□□□ -1.22
TFB5Q3E7C1 SUV3YPL029W 2214 nt7.43□□□□□ -1.22
TFB5Q3E7C1 ORT1YOR130C 879 nt7.43□□□□□ -1.22
TFB5Q3E7C1 PAB1YER165W 1734 nt7.42□□□□□ -1.22
TFB5Q3E7C1 ADE2YOR128C 1716 nt7.42□□□□□ -1.22
TFB5Q3E7C1 DAK2YFL053W 1776 nt7.42□□□□□ -1.22
TFB5Q3E7C1 VRG4YGL225W 1014 nt7.42□□□□□ -1.22
TFB5Q3E7C1 YJR114WYJR114W 393 nt7.42□□□□□ -1.22
TFB5Q3E7C1 YLR111WYLR111W 333 nt7.42□□□□□ -1.22
TFB5Q3E7C1 MLS1YNL117W 1665 nt7.41□□□□□ -1.22
TFB5Q3E7C1 YJL055WYJL055W 738 nt7.41□□□□□ -1.22
TFB5Q3E7C1 MGM101YJR144W 810 nt7.41□□□□□ -1.22
TFB5Q3E7C1 YBL095WYBL095W 813 nt7.41□□□□□ -1.22
TFB5Q3E7C1 snR31snR31 225 nt7.41□□□□□ -1.22
TFB5Q3E7C1 CBK1YNL161W 2271 nt7.41□□□□□ -1.22
TFB5Q3E7C1 GAL3YDR009W 1563 nt7.41□□□□□ -1.22
TFB5Q3E7C1 HXT11YOL156W 1704 nt7.41□□□□□ -1.22
TFB5Q3E7C1 DUR3YHL016C 2208 nt7.4□□□□□ -1.22
TFB5Q3E7C1 ADE8YDR408C 645 nt7.4□□□□□ -1.22
TFB5Q3E7C1 MTO1YGL236C 2010 nt7.4□□□□□ -1.23
TFB5Q3E7C1 THI6YPL214C 1623 nt7.39□□□□□ -1.23
TFB5Q3E7C1 GPM1YKL152C 744 nt7.39□□□□□ -1.23
TFB5Q3E7C1 TRP2YER090W 1524 nt7.38□□□□□ -1.23
TFB5Q3E7C1 CAB5YDR196C 726 nt7.38□□□□□ -1.23
TFB5Q3E7C1 RTG2YGL252C 1767 nt7.38□□□□□ -1.23
TFB5Q3E7C1 OPI3YJR073C 621 nt7.36□□□□□ -1.23
TFB5Q3E7C1 YRF1-1YDR545W 5391 nt7.36□□□□□ -1.23
TFB5Q3E7C1 YRF1-5YLR467W 5391 nt7.36□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 8.5 ms