Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdkn1aP39689 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdkn1aP39689 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.23■□□□□ 0.83
Cdkn1aP39689 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdkn1aP39689 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdkn1aP39689 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdkn1aP39689 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkn1aP39689 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdkn1aP39689 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cdkn1aP39689 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkn1aP39689 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cdkn1aP39689 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdkn1aP39689 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cdkn1aP39689 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC20.18■□□□□ 0.82
Cdkn1aP39689 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkn1aP39689 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdkn1aP39689 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Cdkn1aP39689 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdkn1aP39689 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.16■□□□□ 0.82
Cdkn1aP39689 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.15■□□□□ 0.82
Cdkn1aP39689 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkn1aP39689 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdkn1aP39689 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdkn1aP39689 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cdkn1aP39689 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.14■□□□□ 0.81
Cdkn1aP39689 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.14■□□□□ 0.81
Cdkn1aP39689 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdkn1aP39689 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.13■□□□□ 0.81
Cdkn1aP39689 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.12■□□□□ 0.81
Cdkn1aP39689 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.12■□□□□ 0.81
Cdkn1aP39689 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cdkn1aP39689 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Cdkn1aP39689 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkn1aP39689 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cdkn1aP39689 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkn1aP39689 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkn1aP39689 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdkn1aP39689 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdkn1aP39689 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdkn1aP39689 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdkn1aP39689 Zxda-201ENSMUST00000117281 2621 ntBASIC20.08■□□□□ 0.8
Cdkn1aP39689 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cdkn1aP39689 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.06■□□□□ 0.8
Cdkn1aP39689 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn1aP39689 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.06■□□□□ 0.8
Cdkn1aP39689 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn1aP39689 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cdkn1aP39689 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn1aP39689 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn1aP39689 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cdkn1aP39689 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.04■□□□□ 0.8
Cdkn1aP39689 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cdkn1aP39689 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.04■□□□□ 0.8
Cdkn1aP39689 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cdkn1aP39689 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Cdkn1aP39689 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkn1aP39689 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cdkn1aP39689 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cdkn1aP39689 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn1aP39689 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn1aP39689 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn1aP39689 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdkn1aP39689 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn1aP39689 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20■□□□□ 0.79
Cdkn1aP39689 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20■□□□□ 0.79
Cdkn1aP39689 Gm5987-201ENSMUST00000196433 1151 ntBASIC20■□□□□ 0.79
Cdkn1aP39689 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn1aP39689 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cdkn1aP39689 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.99■□□□□ 0.79
Cdkn1aP39689 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Cdkn1aP39689 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Cdkn1aP39689 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cdkn1aP39689 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.97■□□□□ 0.79
Cdkn1aP39689 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn1aP39689 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdkn1aP39689 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cdkn1aP39689 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdkn1aP39689 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdkn1aP39689 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.94■□□□□ 0.78
Cdkn1aP39689 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdkn1aP39689 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdkn1aP39689 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cdkn1aP39689 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdkn1aP39689 Gm43445-201ENSMUST00000198564 2091 ntBASIC19.93■□□□□ 0.78
Cdkn1aP39689 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdkn1aP39689 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdkn1aP39689 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.93■□□□□ 0.78
Cdkn1aP39689 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdkn1aP39689 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdkn1aP39689 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdkn1aP39689 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdkn1aP39689 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.91■□□□□ 0.78
Cdkn1aP39689 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms