Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.34■□□□□ 0.85
CfdP03953 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CfdP03953 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CfdP03953 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CfdP03953 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CfdP03953 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CfdP03953 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.31■□□□□ 0.84
CfdP03953 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
CfdP03953 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CfdP03953 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.3■□□□□ 0.84
CfdP03953 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CfdP03953 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.3■□□□□ 0.84
CfdP03953 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.29■□□□□ 0.84
CfdP03953 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CfdP03953 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CfdP03953 Gm25262-201ENSMUST00000174934 133 ntBASIC20.28■□□□□ 0.84
CfdP03953 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CfdP03953 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CfdP03953 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CfdP03953 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CfdP03953 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CfdP03953 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CfdP03953 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CfdP03953 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CfdP03953 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CfdP03953 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CfdP03953 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.25■□□□□ 0.83
CfdP03953 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.25■□□□□ 0.83
CfdP03953 Gm27322-201ENSMUST00000184007 104 ntBASIC20.25■□□□□ 0.83
CfdP03953 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CfdP03953 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CfdP03953 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CfdP03953 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CfdP03953 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CfdP03953 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CfdP03953 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CfdP03953 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CfdP03953 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CfdP03953 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CfdP03953 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.22■□□□□ 0.83
CfdP03953 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CfdP03953 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CfdP03953 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CfdP03953 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CfdP03953 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CfdP03953 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CfdP03953 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CfdP03953 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CfdP03953 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CfdP03953 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CfdP03953 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CfdP03953 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CfdP03953 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CfdP03953 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CfdP03953 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CfdP03953 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CfdP03953 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CfdP03953 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CfdP03953 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CfdP03953 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CfdP03953 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CfdP03953 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CfdP03953 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CfdP03953 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.14■□□□□ 0.81
CfdP03953 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CfdP03953 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CfdP03953 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
CfdP03953 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CfdP03953 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.12■□□□□ 0.81
CfdP03953 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.12■□□□□ 0.81
CfdP03953 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CfdP03953 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CfdP03953 Peli2-204ENSMUST00000226513 1320 ntBASIC20.11■□□□□ 0.81
CfdP03953 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CfdP03953 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.1■□□□□ 0.81
CfdP03953 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CfdP03953 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.1■□□□□ 0.81
CfdP03953 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CfdP03953 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CfdP03953 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CfdP03953 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CfdP03953 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CfdP03953 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CfdP03953 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CfdP03953 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CfdP03953 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CfdP03953 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CfdP03953 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CfdP03953 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CfdP03953 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CfdP03953 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CfdP03953 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CfdP03953 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CfdP03953 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.04■□□□□ 0.8
CfdP03953 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CfdP03953 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CfdP03953 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CfdP03953 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CfdP03953 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CfdP03953 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms