Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Gm3727J3QM54 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Gm3727J3QM54 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Gm3727J3QM54 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Gm3727J3QM54 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3727J3QM54 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm3727J3QM54 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3727J3QM54 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3727J3QM54 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Gm3727J3QM54 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Gm3727J3QM54 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm3727J3QM54 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Gm3727J3QM54 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Gm3727J3QM54 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm3727J3QM54 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm3727J3QM54 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3727J3QM54 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm3727J3QM54 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3727J3QM54 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm3727J3QM54 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Gm3727J3QM54 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3727J3QM54 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3727J3QM54 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Gm3727J3QM54 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3727J3QM54 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Gm3727J3QM54 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3727J3QM54 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.46■□□□□ 0.87
Gm3727J3QM54 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gm3727J3QM54 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3727J3QM54 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3727J3QM54 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gm3727J3QM54 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3727J3QM54 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3727J3QM54 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gm3727J3QM54 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gm3727J3QM54 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gm3727J3QM54 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.43■□□□□ 0.86
Gm3727J3QM54 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3727J3QM54 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3727J3QM54 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3727J3QM54 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gm3727J3QM54 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3727J3QM54 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3727J3QM54 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Gm3727J3QM54 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gm3727J3QM54 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.4■□□□□ 0.86
Gm3727J3QM54 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
Gm3727J3QM54 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gm3727J3QM54 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gm3727J3QM54 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3727J3QM54 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gm3727J3QM54 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Gm3727J3QM54 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Gm3727J3QM54 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3727J3QM54 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Gm3727J3QM54 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3727J3QM54 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3727J3QM54 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3727J3QM54 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3727J3QM54 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3727J3QM54 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3727J3QM54 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3727J3QM54 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3727J3QM54 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3727J3QM54 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3727J3QM54 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Gm3727J3QM54 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm3727J3QM54 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3727J3QM54 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3727J3QM54 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3727J3QM54 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm3727J3QM54 AC166822.3-201ENSMUST00000227394 661 ntBASIC20.29■□□□□ 0.84
Gm3727J3QM54 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3727J3QM54 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Gm3727J3QM54 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Gm3727J3QM54 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3727J3QM54 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3727J3QM54 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Gm3727J3QM54 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Gm3727J3QM54 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Gm3727J3QM54 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm3727J3QM54 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Gm3727J3QM54 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.24■□□□□ 0.83
Gm3727J3QM54 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Gm3727J3QM54 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3727J3QM54 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm3727J3QM54 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.23■□□□□ 0.83
Gm3727J3QM54 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms