Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh17E9PXF0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh17E9PXF0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Pcdh17E9PXF0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Pcdh17E9PXF0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Pcdh17E9PXF0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Pcdh17E9PXF0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.6■■□□□ 1.21
Pcdh17E9PXF0 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Pcdh17E9PXF0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Pcdh17E9PXF0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Pcdh17E9PXF0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh17E9PXF0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh17E9PXF0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Pcdh17E9PXF0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.57■■□□□ 1.2
Pcdh17E9PXF0 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.57■■□□□ 1.2
Pcdh17E9PXF0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Pcdh17E9PXF0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.55■■□□□ 1.2
Pcdh17E9PXF0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Pcdh17E9PXF0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh17E9PXF0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Pcdh17E9PXF0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh17E9PXF0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh17E9PXF0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
Pcdh17E9PXF0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh17E9PXF0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Pcdh17E9PXF0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
Pcdh17E9PXF0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Pcdh17E9PXF0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Pcdh17E9PXF0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Pcdh17E9PXF0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh17E9PXF0 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh17E9PXF0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh17E9PXF0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Pcdh17E9PXF0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.47■■□□□ 1.19
Pcdh17E9PXF0 Gm7432-201ENSMUST00000210343 879 ntBASIC22.47■■□□□ 1.19
Pcdh17E9PXF0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Pcdh17E9PXF0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.46■■□□□ 1.19
Pcdh17E9PXF0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh17E9PXF0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
Pcdh17E9PXF0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Pcdh17E9PXF0 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Pcdh17E9PXF0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh17E9PXF0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh17E9PXF0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Pcdh17E9PXF0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh17E9PXF0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh17E9PXF0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.43■■□□□ 1.18
Pcdh17E9PXF0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh17E9PXF0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pcdh17E9PXF0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh17E9PXF0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh17E9PXF0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.41■■□□□ 1.18
Pcdh17E9PXF0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdh17E9PXF0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh17E9PXF0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Pcdh17E9PXF0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdh17E9PXF0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh17E9PXF0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.39■■□□□ 1.17
Pcdh17E9PXF0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdh17E9PXF0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdh17E9PXF0 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.38■■□□□ 1.17
Pcdh17E9PXF0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.38■■□□□ 1.17
Pcdh17E9PXF0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC22.37■■□□□ 1.17
Pcdh17E9PXF0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Pcdh17E9PXF0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdh17E9PXF0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdh17E9PXF0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdh17E9PXF0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh17E9PXF0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC22.34■■□□□ 1.17
Pcdh17E9PXF0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdh17E9PXF0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh17E9PXF0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdh17E9PXF0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC22.33■■□□□ 1.17
Pcdh17E9PXF0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Pcdh17E9PXF0 Gm11599-201ENSMUST00000118720 878 ntBASIC22.32■■□□□ 1.16
Pcdh17E9PXF0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdh17E9PXF0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Pcdh17E9PXF0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh17E9PXF0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh17E9PXF0 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.31■■□□□ 1.16
Pcdh17E9PXF0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdh17E9PXF0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.31■■□□□ 1.16
Pcdh17E9PXF0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdh17E9PXF0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Pcdh17E9PXF0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.29■■□□□ 1.16
Pcdh17E9PXF0 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdh17E9PXF0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.28■■□□□ 1.16
Pcdh17E9PXF0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh17E9PXF0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdh17E9PXF0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh17E9PXF0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdh17E9PXF0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.26■■□□□ 1.15
Pcdh17E9PXF0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Pcdh17E9PXF0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdh17E9PXF0 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Pcdh17E9PXF0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms