Protein–RNA interactions for Protein: A0A140T8M0

Igkv1-117, Immunoglobulin kappa variable 1-117 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-117A0A140T8M0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Igkv1-117A0A140T8M0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Igkv1-117A0A140T8M0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv1-117A0A140T8M0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Igkv1-117A0A140T8M0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv1-117A0A140T8M0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Igkv1-117A0A140T8M0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
Igkv1-117A0A140T8M0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Igkv1-117A0A140T8M0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv1-117A0A140T8M0 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv1-117A0A140T8M0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Igkv1-117A0A140T8M0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Igkv1-117A0A140T8M0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC16■□□□□ 0.15
Igkv1-117A0A140T8M0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC15.99■□□□□ 0.15
Igkv1-117A0A140T8M0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Igkv1-117A0A140T8M0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-117A0A140T8M0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Igkv1-117A0A140T8M0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Igkv1-117A0A140T8M0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv1-117A0A140T8M0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv1-117A0A140T8M0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv1-117A0A140T8M0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Igkv1-117A0A140T8M0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Igkv1-117A0A140T8M0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-117A0A140T8M0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-117A0A140T8M0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Igkv1-117A0A140T8M0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Igkv1-117A0A140T8M0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-117A0A140T8M0 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Igkv1-117A0A140T8M0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Igkv1-117A0A140T8M0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Igkv1-117A0A140T8M0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv1-117A0A140T8M0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Igkv1-117A0A140T8M0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv1-117A0A140T8M0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Igkv1-117A0A140T8M0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Igkv1-117A0A140T8M0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-117A0A140T8M0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Igkv1-117A0A140T8M0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Igkv1-117A0A140T8M0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv1-117A0A140T8M0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Igkv1-117A0A140T8M0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Igkv1-117A0A140T8M0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Igkv1-117A0A140T8M0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Igkv1-117A0A140T8M0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Igkv1-117A0A140T8M0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-117A0A140T8M0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-117A0A140T8M0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Igkv1-117A0A140T8M0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv1-117A0A140T8M0 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Igkv1-117A0A140T8M0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv1-117A0A140T8M0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Igkv1-117A0A140T8M0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-117A0A140T8M0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-117A0A140T8M0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-117A0A140T8M0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Igkv1-117A0A140T8M0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Igkv1-117A0A140T8M0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Igkv1-117A0A140T8M0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Igkv1-117A0A140T8M0 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC15.84■□□□□ 0.13
Igkv1-117A0A140T8M0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Igkv1-117A0A140T8M0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Igkv1-117A0A140T8M0 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC15.83■□□□□ 0.12
Igkv1-117A0A140T8M0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-117A0A140T8M0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-117A0A140T8M0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-117A0A140T8M0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-117A0A140T8M0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Igkv1-117A0A140T8M0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-117A0A140T8M0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Igkv1-117A0A140T8M0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-117A0A140T8M0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Igkv1-117A0A140T8M0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-117A0A140T8M0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Igkv1-117A0A140T8M0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-117A0A140T8M0 Gm25262-201ENSMUST00000174934 133 ntBASIC15.8■□□□□ 0.12
Igkv1-117A0A140T8M0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-117A0A140T8M0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-117A0A140T8M0 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Igkv1-117A0A140T8M0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Igkv1-117A0A140T8M0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv1-117A0A140T8M0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.79■□□□□ 0.12
Igkv1-117A0A140T8M0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv1-117A0A140T8M0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Igkv1-117A0A140T8M0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Igkv1-117A0A140T8M0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Igkv1-117A0A140T8M0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Igkv1-117A0A140T8M0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Igkv1-117A0A140T8M0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.76■□□□□ 0.11
Igkv1-117A0A140T8M0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-117A0A140T8M0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Igkv1-117A0A140T8M0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-117A0A140T8M0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-117A0A140T8M0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Igkv1-117A0A140T8M0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.75■□□□□ 0.11
Igkv1-117A0A140T8M0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-117A0A140T8M0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Igkv1-117A0A140T8M0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv1-117A0A140T8M0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Igkv1-117A0A140T8M0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 206.7 ms