Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.41■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.41■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.4■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.4■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.4■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Igkv16-104A0A0B4J1I1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.36■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.34■■□□□ 1.65
Igkv16-104A0A0B4J1I1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.33■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.33■■□□□ 1.65
Igkv16-104A0A0B4J1I1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Igkv16-104A0A0B4J1I1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.31■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.31■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.3■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.27■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.27■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Igkv16-104A0A0B4J1I1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Igkv16-104A0A0B4J1I1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.24■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.23■■□□□ 1.63
Igkv16-104A0A0B4J1I1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.23■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv16-104A0A0B4J1I1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.22■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Igkv16-104A0A0B4J1I1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Igkv16-104A0A0B4J1I1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
Igkv16-104A0A0B4J1I1 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Igkv16-104A0A0B4J1I1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Igkv16-104A0A0B4J1I1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Igkv16-104A0A0B4J1I1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Igkv16-104A0A0B4J1I1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Igkv16-104A0A0B4J1I1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.13■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.13■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Igkv16-104A0A0B4J1I1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.12■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.12■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.1■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Igkv16-104A0A0B4J1I1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Gm11175-201ENSMUST00000116172 543 ntBASIC25.06■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Igkv16-104A0A0B4J1I1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Mir6538-201ENSMUST00000183713 110 ntBASIC25.04■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Gm30023-201ENSMUST00000197970 889 ntBASIC25.04■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Igkv16-104A0A0B4J1I1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Igkv16-104A0A0B4J1I1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Igkv16-104A0A0B4J1I1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC25■■□□□ 1.59
Igkv16-104A0A0B4J1I1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25■■□□□ 1.59
Igkv16-104A0A0B4J1I1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Igkv16-104A0A0B4J1I1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Igkv16-104A0A0B4J1I1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.98■■□□□ 1.59
Igkv16-104A0A0B4J1I1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Igkv16-104A0A0B4J1I1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Igkv16-104A0A0B4J1I1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Igkv16-104A0A0B4J1I1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms