Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BC053393A0A0B4J1F6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
BC053393A0A0B4J1F6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BC053393A0A0B4J1F6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BC053393A0A0B4J1F6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BC053393A0A0B4J1F6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BC053393A0A0B4J1F6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
BC053393A0A0B4J1F6 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BC053393A0A0B4J1F6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
BC053393A0A0B4J1F6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BC053393A0A0B4J1F6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
BC053393A0A0B4J1F6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
BC053393A0A0B4J1F6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BC053393A0A0B4J1F6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BC053393A0A0B4J1F6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.25■□□□□ 0.67
BC053393A0A0B4J1F6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.25■□□□□ 0.67
BC053393A0A0B4J1F6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BC053393A0A0B4J1F6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BC053393A0A0B4J1F6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BC053393A0A0B4J1F6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BC053393A0A0B4J1F6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BC053393A0A0B4J1F6 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.22■□□□□ 0.67
BC053393A0A0B4J1F6 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
BC053393A0A0B4J1F6 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BC053393A0A0B4J1F6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BC053393A0A0B4J1F6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BC053393A0A0B4J1F6 Gm16148-201ENSMUST00000119653 893 ntBASIC19.2■□□□□ 0.66
BC053393A0A0B4J1F6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BC053393A0A0B4J1F6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
BC053393A0A0B4J1F6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BC053393A0A0B4J1F6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
BC053393A0A0B4J1F6 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BC053393A0A0B4J1F6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
BC053393A0A0B4J1F6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
BC053393A0A0B4J1F6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
BC053393A0A0B4J1F6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BC053393A0A0B4J1F6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BC053393A0A0B4J1F6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BC053393A0A0B4J1F6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
BC053393A0A0B4J1F6 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BC053393A0A0B4J1F6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BC053393A0A0B4J1F6 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.13■□□□□ 0.65
BC053393A0A0B4J1F6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.13■□□□□ 0.65
BC053393A0A0B4J1F6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
BC053393A0A0B4J1F6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BC053393A0A0B4J1F6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BC053393A0A0B4J1F6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
BC053393A0A0B4J1F6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.11■□□□□ 0.65
BC053393A0A0B4J1F6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
BC053393A0A0B4J1F6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
BC053393A0A0B4J1F6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
BC053393A0A0B4J1F6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
BC053393A0A0B4J1F6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC053393A0A0B4J1F6 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
BC053393A0A0B4J1F6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BC053393A0A0B4J1F6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.08■□□□□ 0.65
BC053393A0A0B4J1F6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BC053393A0A0B4J1F6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
BC053393A0A0B4J1F6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
BC053393A0A0B4J1F6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
BC053393A0A0B4J1F6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
BC053393A0A0B4J1F6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BC053393A0A0B4J1F6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
BC053393A0A0B4J1F6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC053393A0A0B4J1F6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
BC053393A0A0B4J1F6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
BC053393A0A0B4J1F6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
BC053393A0A0B4J1F6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC053393A0A0B4J1F6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC053393A0A0B4J1F6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
BC053393A0A0B4J1F6 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC053393A0A0B4J1F6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
BC053393A0A0B4J1F6 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
BC053393A0A0B4J1F6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC053393A0A0B4J1F6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC053393A0A0B4J1F6 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC053393A0A0B4J1F6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
BC053393A0A0B4J1F6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
BC053393A0A0B4J1F6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
BC053393A0A0B4J1F6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
BC053393A0A0B4J1F6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
BC053393A0A0B4J1F6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BC053393A0A0B4J1F6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BC053393A0A0B4J1F6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BC053393A0A0B4J1F6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BC053393A0A0B4J1F6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BC053393A0A0B4J1F6 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BC053393A0A0B4J1F6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BC053393A0A0B4J1F6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BC053393A0A0B4J1F6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BC053393A0A0B4J1F6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BC053393A0A0B4J1F6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BC053393A0A0B4J1F6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BC053393A0A0B4J1F6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms