Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-59A0A0A6YXE0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.16■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv1-59A0A0A6YXE0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-59A0A0A6YXE0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC17.12■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.12■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.09■□□□□ 0.33
Ighv1-59A0A0A6YXE0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv1-59A0A0A6YXE0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-59A0A0A6YXE0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-59A0A0A6YXE0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.05■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-59A0A0A6YXE0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.03■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Amer2-203ENSMUST00000225247 2662 ntBASIC17.02■□□□□ 0.32
Ighv1-59A0A0A6YXE0 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-59A0A0A6YXE0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-59A0A0A6YXE0 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-59A0A0A6YXE0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.98■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.96■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-59A0A0A6YXE0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.94■□□□□ 0.3
Ighv1-59A0A0A6YXE0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms