Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.53■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.52■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Ighv1-52A0A0A6YXC3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-52A0A0A6YXC3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-52A0A0A6YXC3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC18.49■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-52A0A0A6YXC3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-52A0A0A6YXC3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-52A0A0A6YXC3 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.47■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Ighv1-52A0A0A6YXC3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.45■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-52A0A0A6YXC3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ighv1-52A0A0A6YXC3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ighv1-52A0A0A6YXC3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
Ighv1-52A0A0A6YXC3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.37■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.35■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Amer2-203ENSMUST00000225247 2662 ntBASIC18.35■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.34■□□□□ 0.53
Ighv1-52A0A0A6YXC3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.28■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-52A0A0A6YXC3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-52A0A0A6YXC3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.25■□□□□ 0.51
Ighv1-52A0A0A6YXC3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms