Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trav7-4A0A075B6C1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Trav7-4A0A075B6C1 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-4A0A075B6C1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-4A0A075B6C1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-4A0A075B6C1 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-4A0A075B6C1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-4A0A075B6C1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-4A0A075B6C1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trav7-4A0A075B6C1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trav7-4A0A075B6C1 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-4A0A075B6C1 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-4A0A075B6C1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trav7-4A0A075B6C1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-4A0A075B6C1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trav7-4A0A075B6C1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-4A0A075B6C1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trav7-4A0A075B6C1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-4A0A075B6C1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-4A0A075B6C1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-4A0A075B6C1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.4■□□□□ 0.54
Trav7-4A0A075B6C1 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-4A0A075B6C1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-4A0A075B6C1 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trav7-4A0A075B6C1 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.39■□□□□ 0.53
Trav7-4A0A075B6C1 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-4A0A075B6C1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trav7-4A0A075B6C1 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trav7-4A0A075B6C1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-4A0A075B6C1 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trav7-4A0A075B6C1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-4A0A075B6C1 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Trav7-4A0A075B6C1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-4A0A075B6C1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-4A0A075B6C1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-4A0A075B6C1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trav7-4A0A075B6C1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav7-4A0A075B6C1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Trav7-4A0A075B6C1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-4A0A075B6C1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Trav7-4A0A075B6C1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-4A0A075B6C1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trav7-4A0A075B6C1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-4A0A075B6C1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.35■□□□□ 0.53
Trav7-4A0A075B6C1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-4A0A075B6C1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.34■□□□□ 0.53
Trav7-4A0A075B6C1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Trav7-4A0A075B6C1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-4A0A075B6C1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-4A0A075B6C1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-4A0A075B6C1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Trav7-4A0A075B6C1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trav7-4A0A075B6C1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trav7-4A0A075B6C1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
Trav7-4A0A075B6C1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-4A0A075B6C1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-4A0A075B6C1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-4A0A075B6C1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-4A0A075B6C1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trav7-4A0A075B6C1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trav7-4A0A075B6C1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav7-4A0A075B6C1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Trav7-4A0A075B6C1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav7-4A0A075B6C1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Trav7-4A0A075B6C1 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav7-4A0A075B6C1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-4A0A075B6C1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-4A0A075B6C1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-4A0A075B6C1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-4A0A075B6C1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav7-4A0A075B6C1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-4A0A075B6C1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.24■□□□□ 0.51
Trav7-4A0A075B6C1 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7-4A0A075B6C1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav7-4A0A075B6C1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-4A0A075B6C1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-4A0A075B6C1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-4A0A075B6C1 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav7-4A0A075B6C1 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.22■□□□□ 0.51
Trav7-4A0A075B6C1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-4A0A075B6C1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav7-4A0A075B6C1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-4A0A075B6C1 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-4A0A075B6C1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav7-4A0A075B6C1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-4A0A075B6C1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-4A0A075B6C1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav7-4A0A075B6C1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-4A0A075B6C1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-4A0A075B6C1 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-4A0A075B6C1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-4A0A075B6C1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.18■□□□□ 0.5
Trav7-4A0A075B6C1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-4A0A075B6C1 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 186.4 ms