Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6n-5A0A075B621 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-5A0A075B621 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-5A0A075B621 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6n-5A0A075B621 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6n-5A0A075B621 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6n-5A0A075B621 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav6n-5A0A075B621 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trav6n-5A0A075B621 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trav6n-5A0A075B621 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6n-5A0A075B621 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6n-5A0A075B621 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6n-5A0A075B621 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trav6n-5A0A075B621 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6n-5A0A075B621 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6n-5A0A075B621 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Trav6n-5A0A075B621 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav6n-5A0A075B621 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6n-5A0A075B621 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6n-5A0A075B621 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6n-5A0A075B621 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Trav6n-5A0A075B621 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.73■□□□□ 0.59
Trav6n-5A0A075B621 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6n-5A0A075B621 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6n-5A0A075B621 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trav6n-5A0A075B621 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6n-5A0A075B621 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6n-5A0A075B621 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6n-5A0A075B621 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6n-5A0A075B621 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Trav6n-5A0A075B621 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6n-5A0A075B621 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6n-5A0A075B621 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Trav6n-5A0A075B621 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6n-5A0A075B621 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6n-5A0A075B621 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Trav6n-5A0A075B621 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6n-5A0A075B621 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav6n-5A0A075B621 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Trav6n-5A0A075B621 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6n-5A0A075B621 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6n-5A0A075B621 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6n-5A0A075B621 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav6n-5A0A075B621 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6n-5A0A075B621 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Trav6n-5A0A075B621 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Trav6n-5A0A075B621 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Trav6n-5A0A075B621 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6n-5A0A075B621 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6n-5A0A075B621 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6n-5A0A075B621 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Trav6n-5A0A075B621 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Trav6n-5A0A075B621 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.64■□□□□ 0.57
Trav6n-5A0A075B621 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Trav6n-5A0A075B621 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6n-5A0A075B621 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Trav6n-5A0A075B621 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6n-5A0A075B621 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6n-5A0A075B621 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.62■□□□□ 0.57
Trav6n-5A0A075B621 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Trav6n-5A0A075B621 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.61■□□□□ 0.57
Trav6n-5A0A075B621 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Trav6n-5A0A075B621 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-5A0A075B621 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Trav6n-5A0A075B621 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-5A0A075B621 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-5A0A075B621 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Trav6n-5A0A075B621 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-5A0A075B621 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-5A0A075B621 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Trav6n-5A0A075B621 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Trav6n-5A0A075B621 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Trav6n-5A0A075B621 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC18.56■□□□□ 0.56
Trav6n-5A0A075B621 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-5A0A075B621 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Trav6n-5A0A075B621 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-5A0A075B621 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Trav6n-5A0A075B621 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-5A0A075B621 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-5A0A075B621 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.54■□□□□ 0.56
Trav6n-5A0A075B621 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.54■□□□□ 0.56
Trav6n-5A0A075B621 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trav6n-5A0A075B621 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.54■□□□□ 0.56
Trav6n-5A0A075B621 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trav6n-5A0A075B621 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav6n-5A0A075B621 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trav6n-5A0A075B621 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-5A0A075B621 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-5A0A075B621 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav6n-5A0A075B621 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-5A0A075B621 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-5A0A075B621 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav6n-5A0A075B621 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav6n-5A0A075B621 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Trav6n-5A0A075B621 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Trav6n-5A0A075B621 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC18.49■□□□□ 0.55
Trav6n-5A0A075B621 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6n-5A0A075B621 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.49■□□□□ 0.55
Trav6n-5A0A075B621 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav6n-5A0A075B621 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms