Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-1A0A075B606 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-1A0A075B606 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-1A0A075B606 Gm8503-201ENSMUST00000118131 455 ntBASIC17.65■□□□□ 0.42
Trav13d-1A0A075B606 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav13d-1A0A075B606 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Trav13d-1A0A075B606 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-1A0A075B606 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-1A0A075B606 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.64■□□□□ 0.41
Trav13d-1A0A075B606 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav13d-1A0A075B606 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav13d-1A0A075B606 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-1A0A075B606 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-1A0A075B606 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-1A0A075B606 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC17.62■□□□□ 0.41
Trav13d-1A0A075B606 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trav13d-1A0A075B606 Gm43445-201ENSMUST00000198564 2091 ntBASIC17.62■□□□□ 0.41
Trav13d-1A0A075B606 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-1A0A075B606 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-1A0A075B606 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-1A0A075B606 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav13d-1A0A075B606 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-1A0A075B606 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-1A0A075B606 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-1A0A075B606 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav13d-1A0A075B606 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav13d-1A0A075B606 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav13d-1A0A075B606 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav13d-1A0A075B606 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-1A0A075B606 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-1A0A075B606 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-1A0A075B606 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav13d-1A0A075B606 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-1A0A075B606 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-1A0A075B606 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav13d-1A0A075B606 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Trav13d-1A0A075B606 Nkain2-201ENSMUST00000092602 558 ntBASIC17.55■□□□□ 0.4
Trav13d-1A0A075B606 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Amer2-203ENSMUST00000225247 2662 ntBASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav13d-1A0A075B606 Gm6345-201ENSMUST00000180378 1691 ntBASIC17.53■□□□□ 0.4
Trav13d-1A0A075B606 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav13d-1A0A075B606 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-1A0A075B606 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trav13d-1A0A075B606 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trav13d-1A0A075B606 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.51■□□□□ 0.39
Trav13d-1A0A075B606 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.51■□□□□ 0.39
Trav13d-1A0A075B606 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-1A0A075B606 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trav13d-1A0A075B606 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-1A0A075B606 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trav13d-1A0A075B606 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.5■□□□□ 0.39
Trav13d-1A0A075B606 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Trav13d-1A0A075B606 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Trav13d-1A0A075B606 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-1A0A075B606 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-1A0A075B606 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-1A0A075B606 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-1A0A075B606 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trav13d-1A0A075B606 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Trav13d-1A0A075B606 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trav13d-1A0A075B606 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.48■□□□□ 0.39
Trav13d-1A0A075B606 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.47■□□□□ 0.39
Trav13d-1A0A075B606 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trav13d-1A0A075B606 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13d-1A0A075B606 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13d-1A0A075B606 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav13d-1A0A075B606 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-1A0A075B606 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.45■□□□□ 0.38
Trav13d-1A0A075B606 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-1A0A075B606 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-1A0A075B606 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav13d-1A0A075B606 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-1A0A075B606 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav13d-1A0A075B606 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-1A0A075B606 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-1A0A075B606 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav13d-1A0A075B606 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-1A0A075B606 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Trav13d-1A0A075B606 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-1A0A075B606 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav13d-1A0A075B606 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-1A0A075B606 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-1A0A075B606 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav13d-1A0A075B606 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-1A0A075B606 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-1A0A075B606 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav13d-1A0A075B606 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13d-1A0A075B606 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13d-1A0A075B606 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Trav13d-1A0A075B606 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav13d-1A0A075B606 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.39■□□□□ 0.37
Trav13d-1A0A075B606 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav13d-1A0A075B606 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms