Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 TTLL5-201ENST00000286650 1595 ntTSL 2 BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 NEDD1-203ENST00000429527 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 C2-201ENST00000299367 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 AEBP2-202ENST00000360995 2533 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 STXBP5L-204ENST00000471454 3813 ntAPPRIS ALT1 TSL 2 BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 CNDP1-203ENST00000582365 4111 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
PPP4R1LQ9P1A2 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
PPP4R1LQ9P1A2 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC8.34□□□□□ -1.08
PPP4R1LQ9P1A2 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
PPP4R1LQ9P1A2 ADAMTS3-201ENST00000286657 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 MDH1B-204ENST00000449792 1757 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 MDH1B-205ENST00000454776 1795 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 RCAN1-203ENST00000381135 2526 ntTSL 2 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 IL13-201ENST00000304506 1283 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 RNA5SP452-201ENST00000363004 119 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 MITF-205ENST00000394348 1069 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 EPSTI1-203ENST00000398762 957 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 SCIMP-201ENST00000399600 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ING4-203ENST00000412586 741 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 MIATNB-201ENST00000417083 706 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC008781.1-201ENST00000422040 621 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ING4-204ENST00000423703 602 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC018647.1-201ENST00000432866 1414 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AL049733.1-201ENST00000440178 603 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ING4-206ENST00000444704 678 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 RN7SL798P-201ENST00000468562 301 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ACPP-203ENST00000475741 1242 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 RPL12P37-201ENST00000486874 495 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 SLC35A5-207ENST00000494706 840 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 SPINK1-203ENST00000510027 1188 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 UBB-204ENST00000535788 704 ntTSL 2 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 LINC02328-201ENST00000553668 741 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC106028.1-201ENST00000554322 526 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 MKRN2OS-203ENST00000564146 985 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 FRG2KP-201ENST00000565692 971 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AL158211.1-201ENST00000566763 763 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC103949.1-201ENST00000582064 457 ntTSL 3 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AC119751.8-201ENST00000597032 156 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 CLIC4P2-201ENST00000601934 717 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 NBPF26-207ENST00000619748 2933 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 AL590004.4-201ENST00000566733 7060 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 GFM2-202ENST00000345239 2856 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 TMEM161B-201ENST00000296595 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ZSCAN23-201ENST00000289788 3126 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 SLFN12-202ENST00000394562 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 LCA5-201ENST00000369846 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 CYB5B-202ENST00000512062 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 SPTAN1-223ENST00000630866 7498 ntTSL 5 BASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 CCDC144B-201ENST00000285176 4310 ntBASIC8.33□□□□□ -1.08
PPP4R1LQ9P1A2 ZNF502-204ENST00000449836 3173 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 KCTD16-202ENST00000512467 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 FHAD1-206ENST00000375998 4355 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 ZNF641-202ENST00000448928 1856 ntTSL 2 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 AC004491.1-201ENST00000623029 1882 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 EYA3-201ENST00000373863 1729 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 HAUS6-201ENST00000380496 3756 ntTSL 2 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 KCNK2-202ENST00000391895 1410 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 MCTP1-202ENST00000429576 3159 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 SLC25A51-201ENST00000242275 1130 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 LCN1P1-201ENST00000372031 505 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 SNORA7.3-201ENST00000384186 139 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 LDHAP7-201ENST00000398295 965 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 MED15P4-201ENST00000417579 393 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 FAM213AP1-201ENST00000418757 668 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 BX470209.2-201ENST00000442086 928 ntTSL 3 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 PFN1P1-201ENST00000442087 423 ntBASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 EAF2-202ENST00000451944 960 ntTSL 2 BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 DNAJC9-AS1-202ENST00000457147 762 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PPP4R1LQ9P1A2 RN7SL449P-201ENST00000464937 286 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms