Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
AP4B1Q9Y6B7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 AC027612.3-201ENST00000413684 1047 ntBASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.56■□□□□ 0.72
AP4B1Q9Y6B7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 SMUG1P1-201ENST00000590640 811 ntBASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 AC116562.4-201ENST00000641316 2276 ntBASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AP4B1Q9Y6B7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.54■□□□□ 0.72
AP4B1Q9Y6B7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms