Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CDCA4P2-201ENST00000441182 718 ntBASIC20.53■□□□□ 0.88
PKP3Q9Y446 AC026185.1-201ENST00000445748 174 ntBASIC20.53■□□□□ 0.88
PKP3Q9Y446 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 AC005181.1-201ENST00000604782 1256 ntBASIC20.53■□□□□ 0.88
PKP3Q9Y446 AC016405.3-201ENST00000607710 860 ntBASIC20.53■□□□□ 0.88
PKP3Q9Y446 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 AC027702.1-201ENST00000563810 1770 ntBASIC20.53■□□□□ 0.88
PKP3Q9Y446 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PKP3Q9Y446 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.53■□□□□ 0.88
PKP3Q9Y446 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PKP3Q9Y446 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP3Q9Y446 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP3Q9Y446 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP3Q9Y446 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP3Q9Y446 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PKP3Q9Y446 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP3Q9Y446 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.52■□□□□ 0.88
PKP3Q9Y446 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PKP3Q9Y446 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PKP3Q9Y446 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PKP3Q9Y446 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PKP3Q9Y446 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PKP3Q9Y446 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PKP3Q9Y446 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PKP3Q9Y446 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PKP3Q9Y446 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PKP3Q9Y446 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PKP3Q9Y446 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PKP3Q9Y446 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 RARRES2P4-201ENST00000514074 484 ntBASIC20.51■□□□□ 0.87
PKP3Q9Y446 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PKP3Q9Y446 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PKP3Q9Y446 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
PKP3Q9Y446 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 FP700111.2-201ENST00000619190 1892 ntBASIC20.5■□□□□ 0.87
PKP3Q9Y446 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 AC007225.1-201ENST00000566331 1836 ntBASIC20.5■□□□□ 0.87
PKP3Q9Y446 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PKP3Q9Y446 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PKP3Q9Y446 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.49■□□□□ 0.87
PKP3Q9Y446 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PKP3Q9Y446 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PKP3Q9Y446 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PKP3Q9Y446 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms