Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 AC091799.1-201ENST00000422823 811 ntBASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 CDV3P1-201ENST00000471403 739 ntBASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
NPIPA1Q9UND3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 AL355472.2-201ENST00000422958 438 ntBASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 AL024507.2-201ENST00000606070 2574 ntBASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 AF106564.1-201ENST00000607058 2553 ntBASIC18.84■□□□□ 0.61
NPIPA1Q9UND3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NPIPA1Q9UND3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 ESRRAP1-201ENST00000400596 1257 ntBASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NPIPA1Q9UND3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPIPA1Q9UND3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 PRORSD1P-201ENST00000295112 541 ntBASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.81■□□□□ 0.6
NPIPA1Q9UND3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms