Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 AC080038.1-201ENST00000611274 1154 ntBASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 GABARAPL3-202ENST00000624044 1851 ntBASIC21.05■□□□□ 0.96
PHTF1Q9UMS5 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHTF1Q9UMS5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 AC010536.3-201ENST00000620306 533 ntBASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.03■□□□□ 0.96
PHTF1Q9UMS5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHTF1Q9UMS5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PHTF1Q9UMS5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.02■□□□□ 0.95
PHTF1Q9UMS5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.02■□□□□ 0.95
PHTF1Q9UMS5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
PHTF1Q9UMS5 AP005212.1-201ENST00000581547 1997 ntBASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 TERF1P5-201ENST00000477545 1207 ntBASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 DUX4L16-201ENST00000555130 1264 ntBASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHTF1Q9UMS5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21■□□□□ 0.95
PHTF1Q9UMS5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PHTF1Q9UMS5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21■□□□□ 0.95
PHTF1Q9UMS5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHTF1Q9UMS5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21■□□□□ 0.95
PHTF1Q9UMS5 AC243732.1-201ENST00000612648 864 ntBASIC21■□□□□ 0.95
PHTF1Q9UMS5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms