Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PARPBPQ9NWS1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 AL137060.1-201ENST00000618151 2648 ntBASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 AF201337.1-201ENST00000520239 748 ntBASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PARPBPQ9NWS1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PARPBPQ9NWS1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PARPBPQ9NWS1 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PARPBPQ9NWS1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.27■□□□□ 0.51
PARPBPQ9NWS1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
PARPBPQ9NWS1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 AL121832.2-201ENST00000610979 668 ntBASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 AC100791.3-201ENST00000617619 330 ntBASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.26■□□□□ 0.51
PARPBPQ9NWS1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 AC016405.3-201ENST00000607710 860 ntBASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.25■□□□□ 0.51
PARPBPQ9NWS1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 PGM5P4-201ENST00000421970 445 ntBASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 NCF1B-203ENST00000435988 1254 ntBASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PARPBPQ9NWS1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 GPX1P1-201ENST00000388829 606 ntBASIC18.23■□□□□ 0.51
PARPBPQ9NWS1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms