Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 RARRES2P4-201ENST00000514074 484 ntBASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.82■□□□□ 0.6
UBQLN4Q9NRR5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 PGM5P4-201ENST00000421970 445 ntBASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 AC069236.1-201ENST00000604339 616 ntBASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 AC008694.1-202ENST00000636953 945 ntBASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 AC073111.5-205ENST00000641717 521 ntBASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBQLN4Q9NRR5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 FEM1AP1-201ENST00000431297 1995 ntBASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.8■□□□□ 0.6
UBQLN4Q9NRR5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 CYP2T1P-201ENST00000432607 1285 ntBASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 AC005181.1-201ENST00000604782 1256 ntBASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 AC100791.3-201ENST00000617619 330 ntBASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 OR10C1-204ENST00000622521 1039 ntBASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
UBQLN4Q9NRR5 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 CDCA4P2-201ENST00000441182 718 ntBASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 AC092666.2-201ENST00000613287 246 ntBASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.78■□□□□ 0.6
UBQLN4Q9NRR5 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms