Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CDC42SE2Q9NRR3 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42SE2Q9NRR3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.08□□□□□ -0.15
CDC42SE2Q9NRR3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC14.08□□□□□ -0.15
CDC42SE2Q9NRR3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42SE2Q9NRR3 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC42SE2Q9NRR3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CDC42SE2Q9NRR3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 AC091305.1-201ENST00000479476 895 ntBASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 AL354811.1-201ENST00000610286 706 ntBASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 RARRES2P11-201ENST00000635158 484 ntBASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 AC008406.3-201ENST00000620001 1374 ntBASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC42SE2Q9NRR3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 MIR939-201ENST00000401314 82 ntBASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 AC245052.3-201ENST00000450182 901 ntBASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 TPRG1LP1-201ENST00000598702 760 ntBASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 AC131212.1-201ENST00000613771 668 ntBASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 KRT16P2-201ENST00000414673 1423 ntBASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CDC42SE2Q9NRR3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 TCF3P1-201ENST00000423021 1937 ntBASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 AF213884.3-201ENST00000563833 479 ntBASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 AC120498.10-201ENST00000621827 505 ntBASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CDC42SE2Q9NRR3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms