Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 NEFHP1-201ENST00000412845 2629 ntBASIC18.53■□□□□ 0.56
HMG20AQ9NP66 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.53■□□□□ 0.56
HMG20AQ9NP66 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HMG20AQ9NP66 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.52■□□□□ 0.56
HMG20AQ9NP66 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 AL512408.1-201ENST00000569378 2000 ntBASIC18.52■□□□□ 0.55
HMG20AQ9NP66 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
HMG20AQ9NP66 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
HMG20AQ9NP66 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 AC090340.1-201ENST00000620778 4980 ntBASIC18.5■□□□□ 0.55
HMG20AQ9NP66 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HMG20AQ9NP66 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 AC006455.2-201ENST00000429931 906 ntBASIC18.49■□□□□ 0.55
HMG20AQ9NP66 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 AC099791.2-201ENST00000605725 427 ntBASIC18.49■□□□□ 0.55
HMG20AQ9NP66 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.49■□□□□ 0.55
HMG20AQ9NP66 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
HMG20AQ9NP66 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms