Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
POPDC3Q9HBV1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 NTF6G-201ENST00000591094 616 ntBASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 MIR6821-201ENST00000617625 74 ntBASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
POPDC3Q9HBV1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
POPDC3Q9HBV1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 AC099778.1-201ENST00000568593 1911 ntBASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.11■□□□□ 0.81
POPDC3Q9HBV1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 TERF1P5-201ENST00000477545 1207 ntBASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 AC010536.3-201ENST00000620306 533 ntBASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
POPDC3Q9HBV1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 KRT18P11-201ENST00000435214 1283 ntBASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 AL162412.1-201ENST00000567129 965 ntBASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.09■□□□□ 0.81
POPDC3Q9HBV1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms