Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 UQCRFS1P1-201ENST00000435169 820 ntBASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 Z99916.2-201ENST00000604037 246 ntBASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
SCAF1Q9H7N4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 AC010141.3-201ENST00000456659 717 ntBASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
SCAF1Q9H7N4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 AC091874.3-201ENST00000512672 1195 ntBASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC30.32■■■□□ 2.44
SCAF1Q9H7N4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 AC144652.1-201ENST00000609974 1624 ntBASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 ABHD17AP6-201ENST00000458502 1044 ntBASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 AC010542.4-201ENST00000563151 1910 ntBASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SCAF1Q9H7N4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 STK33P1-201ENST00000423835 1218 ntBASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 AC069236.1-201ENST00000604339 616 ntBASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
SCAF1Q9H7N4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 TERF1P5-201ENST00000477545 1207 ntBASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 BX088651.1-201ENST00000540551 451 ntBASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 TK2-213ENST00000563369 882 ntTSL 5 BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.29■■■□□ 2.44
SCAF1Q9H7N4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 AC068587.7-201ENST00000641602 218 ntBASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
SCAF1Q9H7N4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC30.27■■■□□ 2.44
SCAF1Q9H7N4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms