Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS16Q9H269 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS16Q9H269 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS16Q9H269 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 AC010141.2-201ENST00000452426 721 ntBASIC22.46■■□□□ 1.19
VPS16Q9H269 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS16Q9H269 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
VPS16Q9H269 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS16Q9H269 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.19
VPS16Q9H269 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
VPS16Q9H269 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
VPS16Q9H269 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS16Q9H269 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
VPS16Q9H269 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.45■■□□□ 1.18
VPS16Q9H269 AC104187.1-201ENST00000607510 612 ntBASIC22.45■■□□□ 1.18
VPS16Q9H269 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
VPS16Q9H269 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS16Q9H269 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.45■■□□□ 1.18
VPS16Q9H269 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.44■■□□□ 1.18
VPS16Q9H269 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.44■■□□□ 1.18
VPS16Q9H269 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
VPS16Q9H269 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
VPS16Q9H269 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
VPS16Q9H269 AC120498.10-201ENST00000621827 505 ntBASIC22.44■■□□□ 1.18
VPS16Q9H269 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS16Q9H269 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.43■■□□□ 1.18
VPS16Q9H269 BID-204ENST00000399767 2129 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS16Q9H269 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
VPS16Q9H269 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.43■■□□□ 1.18
VPS16Q9H269 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.43■■□□□ 1.18
VPS16Q9H269 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.43■■□□□ 1.18
VPS16Q9H269 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS16Q9H269 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
VPS16Q9H269 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS16Q9H269 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
VPS16Q9H269 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS16Q9H269 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 LINC02228-203ENST00000641970 1355 ntBASIC22.42■■□□□ 1.18
VPS16Q9H269 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.42■■□□□ 1.18
VPS16Q9H269 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VPS16Q9H269 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS16Q9H269 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS16Q9H269 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.41■■□□□ 1.18
VPS16Q9H269 AC116050.2-201ENST00000612102 1779 ntBASIC22.41■■□□□ 1.18
VPS16Q9H269 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS16Q9H269 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.41■■□□□ 1.18
VPS16Q9H269 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS16Q9H269 AP001160.3-201ENST00000601484 763 ntBASIC22.41■■□□□ 1.18
VPS16Q9H269 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS16Q9H269 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
VPS16Q9H269 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS16Q9H269 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS16Q9H269 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
VPS16Q9H269 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
VPS16Q9H269 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
VPS16Q9H269 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS16Q9H269 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS16Q9H269 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4L2-201ENST00000561772 1275 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4L6-201ENST00000626483 1275 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4L1-201ENST00000627662 1275 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4L8-201ENST00000629013 1275 ntBASIC22.4■■□□□ 1.18
VPS16Q9H269 DUX4L3-201ENST00000630187 1275 ntBASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms