Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 AF186192.3-201ENST00000583427 947 ntBASIC24.86■■□□□ 1.57
VPS33BQ9H267 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.86■■□□□ 1.57
VPS33BQ9H267 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
VPS33BQ9H267 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.86■■□□□ 1.57
VPS33BQ9H267 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 AL355355.2-201ENST00000442321 338 ntBASIC24.85■■□□□ 1.57
VPS33BQ9H267 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VPS33BQ9H267 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VPS33BQ9H267 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS33BQ9H267 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS33BQ9H267 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.85■■□□□ 1.57
VPS33BQ9H267 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
VPS33BQ9H267 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
VPS33BQ9H267 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.84■■□□□ 1.57
VPS33BQ9H267 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
VPS33BQ9H267 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS33BQ9H267 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC24.84■■□□□ 1.57
VPS33BQ9H267 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC24.84■■□□□ 1.57
VPS33BQ9H267 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
VPS33BQ9H267 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 TMPOP1-202ENST00000424642 1267 ntBASIC24.83■■□□□ 1.57
VPS33BQ9H267 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.83■■□□□ 1.57
VPS33BQ9H267 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.83■■□□□ 1.57
VPS33BQ9H267 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.83■■□□□ 1.57
VPS33BQ9H267 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
VPS33BQ9H267 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
VPS33BQ9H267 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
VPS33BQ9H267 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VPS33BQ9H267 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
VPS33BQ9H267 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
VPS33BQ9H267 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC24.82■■□□□ 1.56
VPS33BQ9H267 HES2-206ENST00000489730 730 ntTSL 2 BASIC24.82■■□□□ 1.56
VPS33BQ9H267 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
VPS33BQ9H267 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
VPS33BQ9H267 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.81■■□□□ 1.56
VPS33BQ9H267 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
VPS33BQ9H267 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
VPS33BQ9H267 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 AC023632.3-201ENST00000521633 145 ntBASIC24.81■■□□□ 1.56
VPS33BQ9H267 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.81■■□□□ 1.56
VPS33BQ9H267 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 AL445228.2-201ENST00000605589 952 ntBASIC24.81■■□□□ 1.56
VPS33BQ9H267 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
VPS33BQ9H267 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
VPS33BQ9H267 HTR7P1-201ENST00000538670 1336 ntBASIC24.81■■□□□ 1.56
VPS33BQ9H267 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.8■■□□□ 1.56
VPS33BQ9H267 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.8■■□□□ 1.56
VPS33BQ9H267 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
VPS33BQ9H267 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
VPS33BQ9H267 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
VPS33BQ9H267 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS33BQ9H267 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS33BQ9H267 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 AC092865.7-201ENST00000641832 219 ntBASIC24.79■■□□□ 1.56
VPS33BQ9H267 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS33BQ9H267 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
VPS33BQ9H267 SRI-203ENST00000419179 1307 ntTSL 2 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.79■■□□□ 1.56
VPS33BQ9H267 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS33BQ9H267 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS33BQ9H267 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS33BQ9H267 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
VPS33BQ9H267 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
VPS33BQ9H267 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
VPS33BQ9H267 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
VPS33BQ9H267 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms