Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 RARRES2P11-201ENST00000635158 484 ntBASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
POLR2J3Q9H1A7 AC007952.6-201ENST00000573168 2673 ntBASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 AC003957.1-201ENST00000625108 2673 ntBASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 MIR6084-201ENST00000622012 110 ntBASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
POLR2J3Q9H1A7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 AL512408.1-201ENST00000569378 2000 ntBASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 AL162377.1-201ENST00000618844 1793 ntBASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 LINC02228-203ENST00000641970 1355 ntBASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
POLR2J3Q9H1A7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L2-201ENST00000561772 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L6-201ENST00000626483 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L1-201ENST00000627662 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L8-201ENST00000629013 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L3-201ENST00000630187 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L7-201ENST00000630678 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 DUX4L5-201ENST00000630834 1275 ntBASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
POLR2J3Q9H1A7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 AC112907.3-201ENST00000577781 2400 ntBASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
POLR2J3Q9H1A7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms