Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.14□□□□□ -0.47
LIMD2Q9BT23 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LIMD2Q9BT23 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC026471.6-201ENST00000622954 1905 ntBASIC12.13□□□□□ -0.47
LIMD2Q9BT23 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 SUDS3P1-201ENST00000505831 966 ntBASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC008175.2-201ENST00000612840 297 ntBASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC120498.10-201ENST00000621827 505 ntBASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC055733.4-201ENST00000638462 1354 ntBASIC12.13□□□□□ -0.47
LIMD2Q9BT23 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 STX5-203ENST00000394690 1568 ntTSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC026471.1-201ENST00000564629 3026 ntBASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC12.13□□□□□ -0.47
LIMD2Q9BT23 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 MFF-207ENST00000409565 1548 ntTSL 2 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 LETM1P2-201ENST00000597330 2178 ntBASIC12.12□□□□□ -0.47
LIMD2Q9BT23 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 AK1-201ENST00000223836 736 ntTSL 3 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 HYI-206ENST00000372434 1025 ntTSL 5 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 AC079140.4-201ENST00000507448 529 ntBASIC12.12□□□□□ -0.47
LIMD2Q9BT23 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 AL031432.3-201ENST00000607698 485 ntBASIC12.12□□□□□ -0.47
LIMD2Q9BT23 AC005837.3-201ENST00000612163 286 ntBASIC12.12□□□□□ -0.47
LIMD2Q9BT23 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC12.12□□□□□ -0.47
LIMD2Q9BT23 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 NARF-205ENST00000412079 1760 ntTSL 5 BASIC12.11□□□□□ -0.47
LIMD2Q9BT23 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms