Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS2Q99743 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.97■□□□□ 0.79
NPAS2Q99743 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS2Q99743 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.97■□□□□ 0.79
NPAS2Q99743 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.97■□□□□ 0.79
NPAS2Q99743 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.97■□□□□ 0.79
NPAS2Q99743 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
NPAS2Q99743 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
NPAS2Q99743 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NPAS2Q99743 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
NPAS2Q99743 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.97■□□□□ 0.79
NPAS2Q99743 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NPAS2Q99743 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
NPAS2Q99743 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPAS2Q99743 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS2Q99743 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NPAS2Q99743 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.96■□□□□ 0.79
NPAS2Q99743 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS2Q99743 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS2Q99743 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS2Q99743 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS2Q99743 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS2Q99743 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 AL512408.1-201ENST00000569378 2000 ntBASIC19.95■□□□□ 0.78
NPAS2Q99743 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS2Q99743 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
NPAS2Q99743 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS2Q99743 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS2Q99743 AC004911.1-201ENST00000416316 871 ntBASIC19.95■□□□□ 0.78
NPAS2Q99743 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.95■□□□□ 0.78
NPAS2Q99743 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.95■□□□□ 0.78
NPAS2Q99743 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS2Q99743 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS2Q99743 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.94■□□□□ 0.78
NPAS2Q99743 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.94■□□□□ 0.78
NPAS2Q99743 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
NPAS2Q99743 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.94■□□□□ 0.78
NPAS2Q99743 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.94■□□□□ 0.78
NPAS2Q99743 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.94■□□□□ 0.78
NPAS2Q99743 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
NPAS2Q99743 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPAS2Q99743 RARRES2P11-201ENST00000635158 484 ntBASIC19.94■□□□□ 0.78
NPAS2Q99743 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
NPAS2Q99743 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.94■□□□□ 0.78
NPAS2Q99743 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.94■□□□□ 0.78
NPAS2Q99743 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS2Q99743 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS2Q99743 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS2Q99743 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS2Q99743 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS2Q99743 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.93■□□□□ 0.78
NPAS2Q99743 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS2Q99743 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.93■□□□□ 0.78
NPAS2Q99743 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS2Q99743 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
NPAS2Q99743 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
NPAS2Q99743 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS2Q99743 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.93■□□□□ 0.78
NPAS2Q99743 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS2Q99743 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
NPAS2Q99743 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
NPAS2Q99743 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS2Q99743 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS2Q99743 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms